Factsheet for GSMUA_Achr4P28860_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P16990_001	Banana	cytosol	73.09	72.85
GSMUA_Achr5P03490_001	Banana	plastid	68.44	66.24
GSMUA_Achr3P03360_001	Banana	cytosol	72.43	66.06
TraesCS1D01G198500.1	Wheat	cytosol	63.46	62.01
TraesCS1B01G209700.1	Wheat	cytosol	62.46	61.24
TraesCS1A01G194900.1	Wheat	cytosol	61.79	60.19
Zm00001d051557_P001	Maize	plastid	40.2	59.61
VIT_02s0012g01570.t01	Wine grape	extracellular	57.14	59.11
KRH39555	Soybean	cytosol	58.14	58.53
PGSC0003DMT400019823	Potato	cytosol, plastid	60.13	57.64
Solyc06g061280.2.1	Tomato	cytosol, plastid	59.14	57.23
KRH74401	Soybean	cytosol	56.81	57.19
Zm00001d034716_P001	Maize	cytosol, nucleus, peroxisome	41.53	57.08
Os10t0576900-01	Rice	cytosol	60.47	57.05
Zm00001d030090_P001	Maize	cytosol, plastid	61.46	56.57
EER94430	Sorghum	cytosol	62.13	56.5
Solyc08g076790.2.1	Tomato	cytosol	58.47	55.87
KRH45421	Soybean	cytosol	53.49	54.21
VIT_16s0039g01670.t01	Wine grape	cytosol	56.15	54.17
Solyc03g097170.2.1	Tomato	cytosol	53.49	49.09
PGSC0003DMT400008172	Potato	cytosol	53.16	46.65
CDX72244	Canola	cytosol	43.19	42.9
Bra024073.1-P	Field mustard	cytosol	43.19	42.9
AT2G23910.1	Thale cress	cytosol	42.52	42.11
AT4G30470.1	Thale cress	cytosol	41.86	41.58
Bra032137.1-P	Field mustard	cytosol	41.53	41.25
CDY65186	Canola	cytosol	41.2	40.92
CDY39681	Canola	cytosol	41.2	40.92
CDY39207	Canola	cytosol, extracellular, nucleus	14.95	34.88
PGSC0003DMT400045216	Potato	plastid	57.81	31.02
GSMUA_Achr5P09070_001	Banana	cytosol, mitochondrion	32.89	27.35
GSMUA_Achr6P23260_001	Banana	cytosol	32.56	27.0
GSMUA_Achr6P27330_001	Banana	cytosol	24.58	22.02
GSMUA_Achr9P07010_001	Banana	cytosol	29.57	21.65

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	InterPro:3Beta_OHSteriod_DH/Estase	GO:GO:0003674	GO:GO:0003824	GO:GO:0003854
GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016491
GO:GO:0016616	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr4G28860_001	EnsemblPlants:GSMUA_Achr4P28860_001	EnsemblPlants:GSMUA_Achr4T28860_001	UniProt:M0SSZ8
InterPro:NAD(P)-bd_dom_sf	PFAM:PF01073	PANTHER:PTHR10366	PANTHER:PTHR10366:SF428	SUPFAM:SSF51735	UniParc:UPI000296F9BF

Description

Putative Dihydroflavonol-4-reductase [Source:GMGC_GENE;Acc:GSMUA_Achr4G28860_001]

Coordinates

chr4:+:27090214..27092040

Molecular Weight (calculated)

33604.3 Da

IEP (calculated)

6.168

GRAVY (calculated)

-0.107

Length

301 amino acids

Sequence
(BLAST)

001: MAPAFVHRDR NTVCVMDASC RLGISLVRRL LQRGCTVHAA SYHHGESSGV LKRMCSENRR LKLFQADPFD YQTIVDAVKG CSGLFYTFEP PQDESYDELM
101: VEVEVRAAHN VVEACAQVDT IERVVFTSSV TAVVWKENRK LAADVDEREW SEPNFCRKFK LWHALAKTLA EKTAWALAMD RGVDMVSVNA GLLTGPEISV
201: SNPYLKGAPQ MYEDGVLVTV DIDFLVDAHI AVYEGPSAYG RYLCFSNVVC RPPDAVKLAQ LVSPDAPSSP QSNELKVIAQ RIQNKKLSKL MVDFDVRIQV
301: E

Best Arabidopsis Sequence Match ( AT2G23910.1 )
(BLAST)

001: MNQEKTISCC CVLDASTYVG FWILKRLLTR GYSVHAAIRK NGESVLEEKI RDMEANEERL EVYDVDVLDY QSILISLNNC NAVFCCLDNP EGYDEEKEVD
101: LEVRGAINVV EACARTESIE KIVFSSSLTA AIWRDNIGTQ KDVDEKCWSD LDFCLKKKLW HALAKTQSEK AAWALAMDRM VNMVSVNPGL IVGPSVAQHN
201: PRPTMSYLKG AAQMYENGVL AYVDVEFVAD VHIRAFEDTS ACGRYFCFNQ IVNTEEEALK LVQTLSPLIP MPPRHEKEMQ GSEVYEERLR NKKLNKLVEA
301: GFAC

Arabidopsis Description

At2g23910 [Source:UniProtKB/TrEMBL;Acc:O82219]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.