Factsheet for Zm00001d030090_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94430	Sorghum	cytosol	85.32	84.29
Zm00001d051557_P001	Maize	plastid	51.99	83.74
Zm00001d034716_P001	Maize	cytosol, nucleus, peroxisome	51.38	76.71
TraesCS1D01G198500.1	Wheat	cytosol	70.03	74.35
TraesCS1A01G194900.1	Wheat	cytosol	70.03	74.11
TraesCS1B01G209700.1	Wheat	cytosol	68.5	72.96
Os10t0576900-01	Rice	cytosol	67.28	68.97
GSMUA_Achr4P16990_001	Banana	cytosol	58.1	62.91
GSMUA_Achr4P28860_001	Banana	plastid	56.57	61.46
GSMUA_Achr5P03490_001	Banana	plastid	55.35	58.2
GSMUA_Achr3P03360_001	Banana	cytosol	55.66	55.15
VIT_02s0012g01570.t01	Wine grape	extracellular	48.32	54.3
KRH39555	Soybean	cytosol	48.62	53.18
KRH74401	Soybean	cytosol	48.01	52.51
KRH45421	Soybean	cytosol	45.57	50.17
Solyc08g076790.2.1	Tomato	cytosol	48.01	49.84
PGSC0003DMT400019823	Potato	cytosol, plastid	47.4	49.36
Solyc06g061280.2.1	Tomato	cytosol, plastid	46.79	49.2
VIT_16s0039g01670.t01	Wine grape	cytosol	46.79	49.04
Solyc03g097170.2.1	Tomato	cytosol	45.87	45.73
PGSC0003DMT400008172	Potato	cytosol	46.18	44.02
AT2G23910.1	Thale cress	cytosol	39.45	42.43
CDX72244	Canola	cytosol	38.53	41.58
Bra024073.1-P	Field mustard	cytosol	38.53	41.58
CDY39681	Canola	cytosol	38.23	41.25
CDY65186	Canola	cytosol	38.23	41.25
Bra032137.1-P	Field mustard	cytosol	37.92	40.92
AT4G30470.1	Thale cress	cytosol	37.61	40.59
CDY39207	Canola	cytosol, extracellular, nucleus	13.46	34.11
Zm00001d044104_P001	Maize	cytosol	32.72	28.76
Zm00001d011446_P001	Maize	cytosol	32.72	28.08
Zm00001d009666_P001	Maize	cytosol	31.19	27.35
PGSC0003DMT400045216	Potato	plastid	46.79	27.27

Protein Annotations

EntrezGene:100193580	Gene3D:3.40.50.720	MapMan:35.1	UniProt:B4F9C1	EMBL:BT033709	EMBL:BT034917
EMBL:BT035881	EMBL:BT064458	EMBL:BT066511	ncoils:Coil	EMBL:EU969261	InterPro:Epimerase_deHydtase
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0050662	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM00145.1
PFAM:PF01370	PANTHER:PTHR10366	PANTHER:PTHR10366:SF428	SUPFAM:SSF51735	UniParc:UPI00017B6095	EnsemblPlantsGene:Zm00001d030090
EnsemblPlants:Zm00001d030090_P001	EnsemblPlants:Zm00001d030090_T001	SEG:seg	:	:	:

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr1:+:104849146..104852816

Molecular Weight (calculated)

34547.1 Da

IEP (calculated)

5.784

GRAVY (calculated)

0.059

Length

327 amino acids

Sequence
(BLAST)

001: MCPGSVESSS AAAAGKSVCV MDAAGPLGHA LVDRLLRRGY TVHAATYARD GEEGAAAAAL LGHLSCAADA CRHRLKLFRA DPFDYHAIAD AVRGCAGVFC
101: MFNTPDDQAQ CDESTVETEV RAAHNVLEAC AQTDAMERVV FTSSVTAVVW SGAGAGVGAH REEVADERSW SDLAFCRKFK LWHALAKTLS EKTAWALAMD
201: RGVDMVAINA GLLLAAPGLG LTAAHPYLKG APDMYDGGVL ATVDVGFLAD AHVAAYESPT AYGRYLCFSN AVCRPEDAVK LAQMLSPAAP RSPPPSDELK
301: VIPQRIQGKK LNKLMLEFAS GVYGELD

Best Arabidopsis Sequence Match ( AT2G23910.1 )
(BLAST)

001: MNQEKTISCC CVLDASTYVG FWILKRLLTR GYSVHAAIRK NGESVLEEKI RDMEANEERL EVYDVDVLDY QSILISLNNC NAVFCCLDNP EGYDEEKEVD
101: LEVRGAINVV EACARTESIE KIVFSSSLTA AIWRDNIGTQ KDVDEKCWSD LDFCLKKKLW HALAKTQSEK AAWALAMDRM VNMVSVNPGL IVGPSVAQHN
201: PRPTMSYLKG AAQMYENGVL AYVDVEFVAD VHIRAFEDTS ACGRYFCFNQ IVNTEEEALK LVQTLSPLIP MPPRHEKEMQ GSEVYEERLR NKKLNKLVEA
301: GFAC

Arabidopsis Description

At2g23910 [Source:UniProtKB/TrEMBL;Acc:O82219]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.