Factsheet for Zm00001d044104_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003129_P001
Zm00001d017186_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14700.1	Zm00001d003129_P001	AT5G48930.1	21798944
AT5G14700.1	Zm00001d017186_P001	AT5G48930.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87211	Sorghum	cytosol	73.12	96.45
Zm00001d011446_P001	Maize	cytosol	92.74	90.55
KXG22093	Sorghum	cytosol	24.19	87.38
TraesCS3A01G229700.1	Wheat	cytosol	82.26	82.93
HORVU3Hr1G057200.1	Barley	cytosol	83.06	82.62
Os01t0639200-01	Rice	cytosol	84.14	82.59
TraesCS3B01G259000.1	Wheat	cytosol, peroxisome, plastid	82.53	82.53
TraesCS3D01G223500.1	Wheat	cytosol	81.72	81.5
Zm00001d009666_P001	Maize	cytosol	73.12	72.92
KRH56594	Soybean	cytosol	35.48	49.25
KRG93279	Soybean	cytosol	27.42	47.89
Bra008743.1-P	Field mustard	cytosol	44.35	44.84
CDY09878	Canola	cytosol	44.09	44.57
CDX69564	Canola	cytosol	44.09	44.57
AT5G14700.1	Thale cress	cytosol	44.09	44.57
VIT_14s0066g01150.t01	Wine grape	cytosol	43.01	44.32
KRG93276	Soybean	cytosol	42.74	43.92
Bra023481.1-P	Field mustard	cytosol	42.47	43.05
CDX85588	Canola	cytosol	42.47	42.93
CDX91029	Canola	cytosol	42.2	42.78
Zm00001d034716_P001	Maize	cytosol, nucleus, peroxisome	22.04	37.44
Zm00001d030090_P001	Maize	cytosol, plastid	28.76	32.72
Zm00001d051557_P001	Maize	plastid	17.47	32.02

Protein Annotations

EntrezGene:103651450	Gene3D:3.40.50.720	MapMan:35.1	InterPro:3Beta_OHSteriod_DH/Estase	UniProt:A0A1D6NHS7	GO:GO:0003674
GO:GO:0003824	GO:GO:0003854	GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016491	GO:GO:0016616	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM39934.1
PFAM:PF01073	PANTHER:PTHR10366	PANTHER:PTHR10366:SF567	SUPFAM:SSF51735	UniParc:UPI000221EC2A	EnsemblPlantsGene:Zm00001d044104
EnsemblPlants:Zm00001d044104_P001	EnsemblPlants:Zm00001d044104_T001	SEG:seg	:	:	:

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr3:+:219356840..219363288

Molecular Weight (calculated)

40299.9 Da

IEP (calculated)

8.017

GRAVY (calculated)

-0.231

Length

372 amino acids

Sequence
(BLAST)

001: MGVLRSTQSL QAEVDELRAA LLAGGGHEAA GGWRRSAGHA DAKRSPGGDA GGAAARAVCV TGGISFVGFA VVDRLLRHGY TVRLALETQE DMDKLREMEM
101: FGDDGRDGVW TVMANVMDPE SLHRAFDGCA GVFHTSAFVD PGGMSGYTKH MATLEAQAAE RVIEACVRTG SVRKCVFTSS LLACVWRQNN PHGRRCPTII
201: DESCWSDESF CRDNKLWFAL GKTAAEKAAW RAARGRDLKL VTICPALVTG PGFRRRNSTA SIAYLKGARA MLADGLLATA NVETVAEAHV LAYEAMGDNT
301: AGGRYICYDH VVKRPEEFAE LERQLGLPGG AAAAQGSDDR PARFELCKRK LSRLMSSRRR CTYDTYYSVA FD

Best Arabidopsis Sequence Match ( AT5G14700.1 )
(BLAST)

001: MRIVRATETF SAELKEFMCA AVQRRKDDDG FRGSRGGGKS RNAMDLDSDA GNRLVCVTGG VSYLGRAIVK RLLVHGYSVR IVVDCPEDKE KVSEMEADAE
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES

Arabidopsis Description

Cinnamoyl CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.