Factsheet for HORVU3Hr1G057200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G081430.3
HORVU2Hr1G086380.1
HORVU6Hr1G056230.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14700.1	HORVU1Hr1G081430.3	AT5G48930.1	21798944
AT5G14700.1	HORVU2Hr1G086380.1	AT5G48930.1	21798944
AT5G14700.1	HORVU6Hr1G056230.2	AT5G48930.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G229700.1	Wheat	cytosol	91.98	93.22
TraesCS3D01G223500.1	Wheat	cytosol	91.98	92.23
TraesCS3B01G259000.1	Wheat	cytosol, peroxisome, plastid	91.18	91.67
OQU87211	Sorghum	cytosol	65.51	86.88
Zm00001d044104_P001	Maize	cytosol	82.62	83.06
Os01t0639200-01	Rice	cytosol	83.69	82.59
Zm00001d011446_P001	Maize	cytosol	80.75	79.27
KXG22093	Sorghum	cytosol	19.52	70.87
HORVU1Hr1G091400.1	Barley	cytosol	44.12	65.22
KRH56594	Soybean	cytosol	33.96	47.39
KRG93279	Soybean	cytosol	26.74	46.95
Bra008743.1-P	Field mustard	cytosol	43.85	44.57
CDY09878	Canola	cytosol	43.58	44.29
CDX69564	Canola	cytosol	43.58	44.29
AT5G14700.1	Thale cress	cytosol	42.78	43.48
KRG93276	Soybean	cytosol	41.71	43.09
VIT_14s0066g01150.t01	Wine grape	cytosol	41.44	42.94
Bra023481.1-P	Field mustard	cytosol	41.98	42.78
CDX85588	Canola	cytosol	41.98	42.66
CDX91029	Canola	cytosol	41.71	42.51
HORVU1Hr1G091350.2	Barley	cytosol, plastid	26.74	37.45

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	InterPro:3Beta_OHSteriod_DH/Estase	UniProt:A0A287L5N5	GO:GO:0003674	GO:GO:0003824
GO:GO:0003854	GO:GO:0006629	GO:GO:0006694	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009605	GO:GO:0009607	GO:GO:0009809	GO:GO:0009987	GO:GO:0016491
GO:GO:0016616	GO:GO:0019748	GO:GO:0042742	GO:GO:0055114	EnsemblPlantsGene:HORVU3Hr1G057200	EnsemblPlants:HORVU3Hr1G057200.1
InterPro:NAD(P)-bd_dom_sf	PFAM:PF01073	PANTHER:PTHR10366	PANTHER:PTHR10366:SF567	SUPFAM:SSF51735	UniParc:UPI000B46323C
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:428567605..428574020

Molecular Weight (calculated)

40925.6 Da

IEP (calculated)

7.135

GRAVY (calculated)

-0.269

Length

374 amino acids

Sequence
(BLAST)

001: MGVLRSTQSM QAEVEEMRAA LFHGAGAGGA AGWRPSAGDN DVKRATGGDE SAAGPRTVCV TGGISFVGFA IVDRLLRHGY TVRLALETQE DLDKLREMEM
101: FGEDGRDGVW TVMANVMEPE SLHRAFDGCA GVFHTSAFVD PGGMSGYTKH MASLEAQAAE RVIEACVRTE SVRKCVFTSS LLACVWRQSY PHERRGPTIV
201: DENCWSDESF CRNNKLWFAL GKTAAEKAAW RAARGRDLKL VTVCPALVTG PGFRRRNSTA SIAYLKGSGV MLADGVLATA NVETVAEAHV RAYEAMGDNT
301: AGGRYICYDH VIQSAQEFAE LERQLGIPSR TVATQSVGDD RPARFELCKR KLGRLMSSRR RCTYDDYYCP VTFE

Best Arabidopsis Sequence Match ( AT5G14700.1 )
(BLAST)

001: MRIVRATETF SAELKEFMCA AVQRRKDDDG FRGSRGGGKS RNAMDLDSDA GNRLVCVTGG VSYLGRAIVK RLLVHGYSVR IVVDCPEDKE KVSEMEADAE
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES

Arabidopsis Description

Cinnamoyl CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.