Factsheet for Bra008743.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra033526.1-P
Bra036480.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14700.1	Bra033526.1-P	AT5G48930.1	21798944
AT5G14700.1	Bra036480.1-P	AT5G48930.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69564	Canola	cytosol	99.73	99.73
AT5G14700.1	Thale cress	cytosol	88.04	88.04
Bra023481.1-P	Field mustard	cytosol	85.33	85.56
KRG93279	Soybean	cytosol	32.07	55.4
KRH56594	Soybean	cytosol	39.4	54.1
KRG93276	Soybean	cytosol	49.18	50.0
VIT_14s0066g01150.t01	Wine grape	cytosol	48.91	49.86
PGSC0003DMT400001401	Potato	cytosol	46.47	47.5
OQU87211	Sorghum	cytosol	35.87	46.81
Solyc02g086770.2.1	Tomato	cytosol	45.11	46.11
Zm00001d044104_P001	Maize	cytosol	44.84	44.35
TraesCS3B01G259000.1	Wheat	cytosol, peroxisome, plastid	44.57	44.09
HORVU3Hr1G057200.1	Barley	cytosol	44.57	43.85
TraesCS3A01G229700.1	Wheat	cytosol	43.75	43.63
TraesCS1A01G417800.1	Wheat	cytosol, peroxisome, plastid	43.21	43.56
Zm00001d009666_P001	Maize	cytosol	43.75	43.16
TraesCS3D01G223500.1	Wheat	cytosol	43.75	43.16
EES18736	Sorghum	cytosol	42.93	43.05
Os01t0639200-01	Rice	cytosol	44.29	43.01
GSMUA_Achr6P23260_001	Banana	cytosol	42.39	42.98
TraesCS1B01G447900.1	Wheat	cytosol, peroxisome, plastid	43.21	42.51
Zm00001d011446_P001	Maize	cytosol	43.75	42.26
Os05t0578500-01	Rice	cytosol	42.66	41.42
HORVU1Hr1G091400.1	Barley	cytosol	28.26	41.11
GSMUA_Achr5P09070_001	Banana	cytosol, mitochondrion	39.67	40.33
Bra024073.1-P	Field mustard	cytosol	27.72	33.66
Bra032137.1-P	Field mustard	cytosol	26.63	32.34
TraesCS1D01G425400.2	Wheat	cytosol	35.05	31.85
GSMUA_Achr9P07010_001	Banana	cytosol	34.78	31.14
KXG22093	Sorghum	cytosol	8.42	30.1
GSMUA_Achr6P27330_001	Banana	cytosol	26.9	29.46
HORVU1Hr1G091350.2	Barley	cytosol, plastid	18.21	25.09

Protein Annotations

EnsemblPlants:Bra008743.1	EnsemblPlants:Bra008743.1-P	EnsemblPlantsGene:Bra008743	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF483
PFAM:PF01370	SEG:seg	SUPFAM:SSF51735	UniParc:UPI00025451A4	UniProt:M4CWZ6	MapMan:35.1

Description

AT5G14700 (E=2e-173) | cinnamoyl-CoA reductase-related

Coordinates

chrA10:+:13667715..13670334

Molecular Weight (calculated)

40453.0 Da

IEP (calculated)

7.025

GRAVY (calculated)

-0.267

Length

368 amino acids

Sequence
(BLAST)

001: MRIVRDSENF SAELKEFLCA AVQRRRDDDG FRGSGGGKSR NAMDLDPDGG NRLVCVTGGV SYLGRAIVKR LLVHGYTVRI VIDCEEDKEK VSEMEADAET
101: ASFSNRITSV VSRLTEIESL VKAFDGCAGV FHTAAFVDPA GISGYSKSMA ELEAKVSENV TEACTRTGSV RKCVFTSSLL ACALQENFYN DLDHSVINEE
201: SWSDEQFCIN NKLWYALGKL KAEKAAWRIA DSKGLKLATI CPALITGPDF FHRNSTSTLA YLKGAKEMYS NGLLATMDVN RLAKAHVRVW EGLGDKTAFG
301: RYICFDTILS KDGAQKLAKD IGVQVEKICG SNSDSNANAE TSTRNLKISD KKLFDLMSRT LRSCYHES

Best Arabidopsis Sequence Match ( AT5G14700.1 )
(BLAST)

001: MRIVRATETF SAELKEFMCA AVQRRKDDDG FRGSRGGGKS RNAMDLDSDA GNRLVCVTGG VSYLGRAIVK RLLVHGYSVR IVVDCPEDKE KVSEMEADAE
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES

Arabidopsis Description

Cinnamoyl CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.