CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH09635
KRH23680
KRH44584
KRH47315

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14700.1	KRH09635	AT5G48930.1	21798944
AT5G14700.1	KRH23680	AT5G48930.1	21798944
AT5G14700.1	KRH44584	AT5G48930.1	21798944
AT5G14700.1	KRH47315	AT5G48930.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56594	Soybean	cytosol	90.14	71.64
KRG93276	Soybean	cytosol	100.0	58.84
HORVU1Hr1G091400.1	Barley	cytosol	47.42	39.92
OQU87211	Sorghum	cytosol	48.36	36.52
VIT_14s0066g01150.t01	Wine grape	cytosol	59.62	35.18
Bra008743.1-P	Field mustard	cytosol	55.4	32.07
CDY09878	Canola	cytosol	55.4	32.07
CDX69564	Canola	cytosol	55.4	32.07
KXG22093	Sorghum	cytosol	15.49	32.04
PGSC0003DMT400001401	Potato	cytosol	53.05	31.39
AT5G14700.1	Thale cress	cytosol	53.52	30.98
Solyc02g086770.2.1	Tomato	cytosol	51.64	30.56
CDX91029	Canola	cytosol	51.64	29.97
Bra023481.1-P	Field mustard	cytosol	51.64	29.97
CDX85588	Canola	cytosol	51.64	29.89
GSMUA_Achr6P23260_001	Banana	cytosol	50.23	29.48
GSMUA_Achr5P09070_001	Banana	cytosol, mitochondrion	48.83	28.73
TraesCS1A01G417800.1	Wheat	cytosol, peroxisome, plastid	47.42	27.67
Os05t0578500-01	Rice	cytosol	48.83	27.44
Zm00001d044104_P001	Maize	cytosol	47.89	27.42
TraesCS3B01G259000.1	Wheat	cytosol, peroxisome, plastid	47.42	27.15
EES18736	Sorghum	cytosol	46.48	26.98
TraesCS3A01G229700.1	Wheat	cytosol	46.48	26.83
TraesCS3D01G223500.1	Wheat	cytosol	46.95	26.81
Zm00001d011446_P001	Maize	cytosol	47.89	26.77
HORVU3Hr1G057200.1	Barley	cytosol	46.95	26.74
TraesCS1B01G447900.1	Wheat	cytosol, peroxisome, plastid	46.95	26.74
Os01t0639200-01	Rice	cytosol	47.42	26.65
Zm00001d009666_P001	Maize	cytosol	45.54	26.01
KRH39555	Soybean	cytosol	33.8	24.08
KRH45421	Soybean	cytosol	33.33	23.91
KRH74401	Soybean	cytosol	33.33	23.75
GSMUA_Achr9P07010_001	Banana	cytosol	36.62	18.98
TraesCS1D01G425400.2	Wheat	cytosol	33.8	17.78
GSMUA_Achr6P27330_001	Banana	cytosol	22.54	14.29
HORVU1Hr1G091350.2	Barley	cytosol, plastid	7.04	5.62

Protein Annotations

EMBL:ACUP02011546	EnsemblPlants:KRG93279	EnsemblPlantsGene:GLYMA_19G007200	EntrezGene:100775262	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf
PANTHER:PTHR10366	PANTHER:PTHR10366:SF483	ProteinID:KRG93279	ProteinID:KRG93279.1	SUPFAM:SSF51735	UniParc:UPI000233EFFF
UniProt:I1N5P5	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:694929..695997

Molecular Weight (calculated)

23848.4 Da

IEP (calculated)

7.358

GRAVY (calculated)

-0.269

Length

213 amino acids

Sequence
(BLAST)

001: MAEIEVRAAE NVMEACARTP SITRCVFTSS LSACVWQDNS QSDFTPVINH ASWSTESFCI EKKLWYALGK MRAEKAAWRI SNERGLKLTT ICPALITGPE
101: FCHRNPTATI AYLKGAQEMY SQGFLASVDV TKLAEAHASV FKAMNNEASG RYICFDHVID THSEAEKLAK DIGMPKEKIC GDASNNSSIH RFELSNEKLC
201: RIMSRPLRCY SEY

Best Arabidopsis Sequence Match ( AT5G14700.1 )
(BLAST)

001: MRIVRATETF SAELKEFMCA AVQRRKDDDG FRGSRGGGKS RNAMDLDSDA GNRLVCVTGG VSYLGRAIVK RLLVHGYSVR IVVDCPEDKE KVSEMEADAE
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES

Arabidopsis Description

Cinnamoyl CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.