Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G14700.1 | CDY05770 | AT5G48930.1 | 21798944 |
| AT5G14700.1 | CDY22880 | AT5G48930.1 | 21798944 |
| AT5G14700.1 | CDY31956 | AT5G48930.1 | 21798944 |
| AT5G14700.1 | CDY44162 | AT5G48930.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023481.1-P | Field mustard | cytosol | 99.73 | 100.0 |
| CDX91029 | Canola | cytosol | 96.2 | 96.46 |
| CDY09878 | Canola | cytosol | 85.87 | 85.87 |
| CDX69564 | Canola | cytosol | 85.05 | 85.05 |
| AT5G14700.1 | Thale cress | cytosol | 84.78 | 84.78 |
| KRH56594 | Soybean | cytosol | 38.04 | 52.24 |
| KRG93279 | Soybean | cytosol | 29.89 | 51.64 |
| KRG93276 | Soybean | cytosol | 48.37 | 49.17 |
| VIT_14s0066g01150.t01 | Wine grape | cytosol | 47.83 | 48.75 |
| PGSC0003DMT400001401 | Potato | cytosol | 46.2 | 47.22 |
| Solyc02g086770.2.1 | Tomato | cytosol | 45.65 | 46.67 |
| OQU87211 | Sorghum | cytosol | 34.51 | 45.04 |
| GSMUA_Achr6P23260_001 | Banana | cytosol | 42.39 | 42.98 |
| TraesCS1A01G417800.1 | Wheat | cytosol, peroxisome, plastid | 42.39 | 42.74 |
| Zm00001d044104_P001 | Maize | cytosol | 42.93 | 42.47 |
| TraesCS3B01G259000.1 | Wheat | cytosol, peroxisome, plastid | 42.66 | 42.2 |
| Zm00001d009666_P001 | Maize | cytosol | 42.66 | 42.09 |
| HORVU3Hr1G057200.1 | Barley | cytosol | 42.66 | 41.98 |
| TraesCS3A01G229700.1 | Wheat | cytosol | 41.85 | 41.73 |
| TraesCS3D01G223500.1 | Wheat | cytosol | 42.12 | 41.55 |
| TraesCS1B01G447900.1 | Wheat | cytosol, peroxisome, plastid | 42.12 | 41.44 |
| EES18736 | Sorghum | cytosol | 41.3 | 41.42 |
| Os01t0639200-01 | Rice | cytosol | 42.39 | 41.16 |
| GSMUA_Achr5P09070_001 | Banana | cytosol, mitochondrion | 40.22 | 40.88 |
| Zm00001d011446_P001 | Maize | cytosol | 41.58 | 40.16 |
| Os05t0578500-01 | Rice | cytosol | 41.03 | 39.84 |
| HORVU1Hr1G091400.1 | Barley | cytosol | 26.9 | 39.13 |
| CDX72244 | Canola | cytosol | 27.72 | 33.66 |
| CDY39207 | Canola | cytosol, extracellular, nucleus | 11.41 | 32.56 |
| CDY39681 | Canola | cytosol | 26.36 | 32.01 |
| CDY65186 | Canola | cytosol | 26.09 | 31.68 |
| TraesCS1D01G425400.2 | Wheat | cytosol | 34.78 | 31.6 |
| GSMUA_Achr9P07010_001 | Banana | cytosol | 33.7 | 30.17 |
| GSMUA_Achr6P27330_001 | Banana | cytosol | 26.09 | 28.57 |
| KXG22093 | Sorghum | cytosol | 7.34 | 26.21 |
| HORVU1Hr1G091350.2 | Barley | cytosol, plastid | 18.21 | 25.09 |
Protein Annotations
| EnsemblPlants:CDX85588 | EnsemblPlantsGene:GSBRNA2T00143309001 | Gene3D:3.40.50.720 | GO:A0A078DE69 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF483 |
| PFAM:PF01370 | ProteinID:CDX85588 | ProteinID:CDX85588.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0004EF09B2 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA02g02250D
Coordinates
chrLK031842:+:781054..784764
Molecular Weight (calculated)
40478.1 Da
IEP (calculated)
7.026
GRAVY (calculated)
-0.286
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MRIVRSSEKF SAELKEFMCA AVQRRRDDDG FRGSRGGKSR NAMDLDSDNG NRLVCVTGGV SYLGRAIVKR LLVHGYSVRI VVDCPAEDKE KVSEMEADAE
101: TASFGNRITS VVSRLTETES LIKAFDGCDG VFHTAAFVDP AGISGYSKSM AELEAKVSEN VIEACTRTGS VRKCVFTSSL LACALKDNSL NDLDHSIINE
201: ESWSDEQLCV HNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFQLNSTSTL AYLKGAKDMY RNRLLATMDV NRLAKVHVRL WEGLGNKTAF
301: GRYICFDTIL SKDGAEKLAK DIGAQIEKIC GSSDDSEENA ETSSTPQISD KKLLDLMSRT LRSCYHES
101: TASFGNRITS VVSRLTETES LIKAFDGCDG VFHTAAFVDP AGISGYSKSM AELEAKVSEN VIEACTRTGS VRKCVFTSSL LACALKDNSL NDLDHSIINE
201: ESWSDEQLCV HNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFQLNSTSTL AYLKGAKDMY RNRLLATMDV NRLAKVHVRL WEGLGNKTAF
301: GRYICFDTIL SKDGAEKLAK DIGAQIEKIC GSSDDSEENA ETSSTPQISD KKLLDLMSRT LRSCYHES
001: MRIVRATETF SAELKEFMCA AVQRRKDDDG FRGSRGGGKS RNAMDLDSDA GNRLVCVTGG VSYLGRAIVK RLLVHGYSVR IVVDCPEDKE KVSEMEADAE
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES
Arabidopsis Description
Cinnamoyl CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.