Factsheet for HORVU1Hr1G091350.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G081430.3
HORVU2Hr1G086380.1
HORVU6Hr1G056230.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14700.1	HORVU1Hr1G081430.3	AT5G48930.1	21798944
AT5G14700.1	HORVU2Hr1G086380.1	AT5G48930.1	21798944
AT5G14700.1	HORVU6Hr1G056230.2	AT5G48930.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G057200.1	Barley	cytosol	37.45	26.74
TraesCS1D01G425400.2	Wheat	cytosol	40.07	26.42
GSMUA_Achr6P27330_001	Banana	cytosol	31.46	25.0
GSMUA_Achr9P07010_001	Banana	cytosol	33.33	21.65
CDX91029	Canola	cytosol	25.84	18.8
AT5G14700.1	Thale cress	cytosol	25.47	18.48
Bra023481.1-P	Field mustard	cytosol	25.09	18.26
KRG93276	Soybean	cytosol	24.72	18.23
Bra008743.1-P	Field mustard	cytosol	25.09	18.21
CDX85588	Canola	cytosol	25.09	18.21
CDY09878	Canola	cytosol	25.09	18.21
VIT_14s0066g01150.t01	Wine grape	cytosol	24.34	18.01
CDX69564	Canola	cytosol	24.72	17.93
KRH56594	Soybean	cytosol	14.98	14.93
KRG93279	Soybean	cytosol	5.62	7.04
HORVU1Hr1G091400.1	Barley	cytosol	4.12	4.35
Solyc08g005120.2.1	Tomato	plastid	0.75	0.84
PGSC0003DMT400045987	Potato	cytosol	1.12	0.57

Protein Annotations

EnsemblPlants:HORVU1Hr1G091350.2	EnsemblPlantsGene:HORVU1Hr1G091350	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0003854
GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016616
GO:GO:0055114	InterPro:3Beta_OHSteriod_DH/Estase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF567	PFAM:PF01073
SEG:seg	SUPFAM:SSF51735	UniParc:UPI000B4812E6	UniProt:A0A287GQ94	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr1H:-:548123982..548126840

Molecular Weight (calculated)

28578.8 Da

IEP (calculated)

7.799

GRAVY (calculated)

-0.228

Length

267 amino acids

Sequence
(BLAST)

001: DPPPAPTPRQ YATPSQGSKV TTRSSHGGAA EHAEHGGGGG GDACGAAAAR GRRRVEVEGR GRGRGGKAAA KRGAGADEGA AEPRAVCVTG GISFLGLALV
101: DRLLRHGYSV RLALETQEDL DKLREMDLFG ENGRDGVWTI MANVMDPESL HRAFDGCVGV FHTSSLVDPG GISGYTVSYT TSINVPKIGR YMSQKFITRE
201: SSCKICWISS SACFVCLRKE DAIIDSVIAP TSQLFFFFFL RISYISTSDT KTFVLSLEEG KEVHIRE

Best Arabidopsis Sequence Match ( AT5G14700.2 )
(BLAST)

001: MRIVRATETF SAELKEFMCA AVQRRKDDDG FRGSRGGGKS RNAMDLDSDA GNRLVCVTGG VSYLGRAIVK RLLVHGYSVR IVVDCPEDKE KVSEMEADAE
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGKLKTN LIMNMNPKLR NRPRIMFIVI

Arabidopsis Description

Cinnamoyl CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.