Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G14700.1 | KRH09635 | AT5G48930.1 | 21798944 |
| AT5G14700.1 | KRH23680 | AT5G48930.1 | 21798944 |
| AT5G14700.1 | KRH44584 | AT5G48930.1 | 21798944 |
| AT5G14700.1 | KRH47315 | AT5G48930.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG93279 | Soybean | cytosol | 71.64 | 90.14 |
| KRG93276 | Soybean | cytosol | 89.18 | 66.02 |
| OQU87211 | Sorghum | cytosol | 49.63 | 47.16 |
| VIT_14s0066g01150.t01 | Wine grape | cytosol | 57.84 | 42.94 |
| HORVU1Hr1G091400.1 | Barley | cytosol | 38.06 | 40.32 |
| PGSC0003DMT400001401 | Potato | cytosol | 53.73 | 40.0 |
| AT5G14700.1 | Thale cress | cytosol | 54.48 | 39.67 |
| Bra008743.1-P | Field mustard | cytosol | 54.1 | 39.4 |
| CDY09878 | Canola | cytosol | 53.73 | 39.13 |
| CDX69564 | Canola | cytosol | 53.73 | 39.13 |
| Solyc02g086770.2.1 | Tomato | cytosol | 51.87 | 38.61 |
| CDX91029 | Canola | cytosol | 52.24 | 38.15 |
| Bra023481.1-P | Field mustard | cytosol | 52.24 | 38.15 |
| CDX85588 | Canola | cytosol | 52.24 | 38.04 |
| GSMUA_Achr6P23260_001 | Banana | cytosol | 48.88 | 36.09 |
| GSMUA_Achr5P09070_001 | Banana | cytosol, mitochondrion | 48.13 | 35.64 |
| Zm00001d044104_P001 | Maize | cytosol | 49.25 | 35.48 |
| Zm00001d011446_P001 | Maize | cytosol | 50.0 | 35.17 |
| TraesCS1A01G417800.1 | Wheat | cytosol, peroxisome, plastid | 47.76 | 35.07 |
| TraesCS3A01G229700.1 | Wheat | cytosol | 47.39 | 34.42 |
| TraesCS3B01G259000.1 | Wheat | cytosol, peroxisome, plastid | 47.76 | 34.41 |
| EES18736 | Sorghum | cytosol | 47.01 | 34.33 |
| Os01t0639200-01 | Rice | cytosol | 48.51 | 34.3 |
| Os05t0578500-01 | Rice | cytosol | 48.51 | 34.3 |
| TraesCS3D01G223500.1 | Wheat | cytosol | 47.39 | 34.05 |
| KXG22093 | Sorghum | cytosol | 13.06 | 33.98 |
| HORVU3Hr1G057200.1 | Barley | cytosol | 47.39 | 33.96 |
| TraesCS1B01G447900.1 | Wheat | cytosol, peroxisome, plastid | 47.01 | 33.69 |
| Zm00001d009666_P001 | Maize | cytosol | 46.27 | 33.24 |
| KRH39555 | Soybean | cytosol | 32.09 | 28.76 |
| KRH45421 | Soybean | cytosol | 31.72 | 28.62 |
| KRH74401 | Soybean | cytosol | 30.97 | 27.76 |
| GSMUA_Achr9P07010_001 | Banana | cytosol | 38.06 | 24.82 |
| TraesCS1D01G425400.2 | Wheat | cytosol | 36.19 | 23.95 |
| GSMUA_Achr6P27330_001 | Banana | cytosol | 26.87 | 21.43 |
| HORVU1Hr1G091350.2 | Barley | cytosol, plastid | 14.93 | 14.98 |
Protein Annotations
| EntrezGene:100818076 | Gene3D:3.40.50.720 | MapMan:35.1 | InterPro:3Beta_OHSteriod_DH/Estase | EMBL:ACUP02002787 | EnsemblPlantsGene:GLYMA_05G006600 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003854 | GO:GO:0006629 | GO:GO:0006694 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016616 | GO:GO:0055114 | UniProt:I1K1H0 | EnsemblPlants:KRH56594 |
| ProteinID:KRH56594 | ProteinID:KRH56594.1 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF01073 | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF483 |
| SUPFAM:SSF51735 | UniParc:UPI00023C435A | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:589985..593584
Molecular Weight (calculated)
29842.5 Da
IEP (calculated)
7.296
GRAVY (calculated)
-0.316
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MERRGEVRAT EGNLKVIMAN LTDVDGLEKA FQGCRGVFHT SAFTDPAGLS GYTKSMAEIE VRAAENVMEA CARTPSITRC VFTSSLSACV WQDNAQSELS
101: SVISHGSWST ESFCTEKKLW YALGKMRAEK AAWRISDERG LKLTTICPAL ITGPEFCNRN PTATIAYLKG AQEMYSRRLL ATVDVTKLAE AHASVFKEMN
201: NNASGRYICF DHVIDTHSEA EKLAKDIGMP EEKICGDASN NSIINRFELS NEKLCRLMSR RLRCYSEY
101: SVISHGSWST ESFCTEKKLW YALGKMRAEK AAWRISDERG LKLTTICPAL ITGPEFCNRN PTATIAYLKG AQEMYSRRLL ATVDVTKLAE AHASVFKEMN
201: NNASGRYICF DHVIDTHSEA EKLAKDIGMP EEKICGDASN NSIINRFELS NEKLCRLMSR RLRCYSEY
001: MRIVRATETF SAELKEFMCA AVQRRKDDDG FRGSRGGGKS RNAMDLDSDA GNRLVCVTGG VSYLGRAIVK RLLVHGYSVR IVVDCPEDKE KVSEMEADAE
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES
Arabidopsis Description
Cinnamoyl CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.