Factsheet for Os05t0578500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0611800-01
Os04t0500700-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14700.1	Os02t0611800-01	AT5G48930.1	21798944
AT5G14700.1	Os04t0500700-02	AT5G48930.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G417800.1	Wheat	cytosol, peroxisome, plastid	78.36	81.37
TraesCS1B01G447900.1	Wheat	cytosol, peroxisome, plastid	77.84	78.88
Os01t0639200-01	Rice	cytosol	75.73	75.73
HORVU1Hr1G091400.1	Barley	cytosol	47.23	70.75
TraesCS1D01G425400.2	Wheat	cytosol	62.27	58.27
KRG93279	Soybean	cytosol	27.44	48.83
KRH56594	Soybean	cytosol	34.3	48.51
GSMUA_Achr9P07010_001	Banana	cytosol	49.87	45.99
GSMUA_Achr6P27330_001	Banana	cytosol	40.11	45.24
VIT_14s0066g01150.t01	Wine grape	cytosol	42.74	44.88
KRG93276	Soybean	cytosol	41.95	43.92
Bra008743.1-P	Field mustard	cytosol	41.42	42.66
CDX69564	Canola	cytosol	41.16	42.39
AT5G14700.1	Thale cress	cytosol	40.9	42.12
CDY09878	Canola	cytosol	40.9	42.12
Bra023481.1-P	Field mustard	cytosol	39.84	41.14
CDX85588	Canola	cytosol	39.84	41.03
CDX91029	Canola	cytosol	39.58	40.87
Os10t0576900-01	Rice	cytosol	26.39	31.35
Solyc08g005120.2.1	Tomato	plastid	1.85	2.93
PGSC0003DMT400045987	Potato	cytosol	2.64	1.9

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	InterPro:3Beta_OHSteriod_DH/Estase	EntrezGene:4339707	ProteinID:AAT39157.1	ProteinID:AAU10688.1
ProteinID:BAF18327.1	ProteinID:BAS95498.1	ProteinID:EEE64805.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003854
GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016491
GO:GO:0016616	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os05g0578500	EnsemblPlants:Os05t0578500-01	PFAM:PF01073
PANTHER:PTHR10366	PANTHER:PTHR10366:SF567	UniProt:Q6L5E8	SUPFAM:SSF51735	UniParc:UPI0000378043	RefSeq:XP_015640759.1
SEG:seg	:	:	:	:	:

Description

NAD(P)-binding domain containing protein. (Os05t0578500-01)

Coordinates

chr5:+:28795466..28801237

Molecular Weight (calculated)

41261.3 Da

IEP (calculated)

7.671

GRAVY (calculated)

-0.172

Length

379 amino acids

Sequence
(BLAST)

001: MGVLRSTQSM EAEVEEMRAA LALAPLGRHG AWRSGAAAKR EAGAEEGAAP EARTVCVTGG ISFVGLAVVD RLLRHGYAVR LALETQEDLD KLREMEMFGE
101: NGRDGVWTVM ANVMDPESLN QAFNGCVGVF HTSSLIDPGG ISGYTKHMAI LEARAAEQVV EACVRTESVR KCVFTSSLLA CVWRQSYPHH RRRFPAIIDE
201: SCWSDESFCR DNKLWFALGK TMAEKAAWRA ARGRDLKLVT ICPALVTGPG FRRRNSTPSI AYLKGAHAML AEGLLATADV ERVAEAHVRV YEAMSGGGAA
301: GGRYICYDHV VRRGEEFAEL QRQLGLPITG VAAASRPGYS DDGDVGGDGR FALCNGKLAR LVSSRRRCTY DVYYPASYD

Best Arabidopsis Sequence Match ( AT5G14700.1 )
(BLAST)

001: MRIVRATETF SAELKEFMCA AVQRRKDDDG FRGSRGGGKS RNAMDLDSDA GNRLVCVTGG VSYLGRAIVK RLLVHGYSVR IVVDCPEDKE KVSEMEADAE
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES

Arabidopsis Description

Cinnamoyl CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.