Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400045987 | Potato | cytosol | 56.9 | 25.86 |
| Solyc08g076790.2.1 | Tomato | cytosol | 4.6 | 3.49 |
| Solyc06g061280.2.1 | Tomato | cytosol, plastid | 3.35 | 2.57 |
| Solyc03g097170.2.1 | Tomato | cytosol | 2.93 | 2.13 |
| Solyc02g086770.2.1 | Tomato | cytosol | 2.93 | 1.94 |
| TraesCS1A01G417800.1 | Wheat | cytosol, peroxisome, plastid | 2.93 | 1.92 |
| TraesCS1B01G447900.1 | Wheat | cytosol, peroxisome, plastid | 2.93 | 1.87 |
| Os05t0578500-01 | Rice | cytosol | 2.93 | 1.85 |
| Solyc02g089770.2.1 | Tomato | cytosol | 2.51 | 1.75 |
| GSMUA_Achr6P27330_001 | Banana | cytosol | 2.09 | 1.49 |
| TraesCS1D01G425400.2 | Wheat | cytosol | 1.67 | 0.99 |
| GSMUA_Achr9P07010_001 | Banana | cytosol | 1.67 | 0.97 |
| HORVU1Hr1G091350.2 | Barley | cytosol, plastid | 0.84 | 0.75 |
Protein Annotations
| EnsemblPlants:Solyc08g005120.2.1 | EnsemblPlantsGene:Solyc08g005120.2 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF428 |
| SEG:seg | SUPFAM:SSF51735 | UniParc:UPI000276B68E | UniProt:K4CI04 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr8:-:75245..78275
Molecular Weight (calculated)
26941.7 Da
IEP (calculated)
7.048
GRAVY (calculated)
-0.028
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPTSPLCCI SNTVYVMGSS TKFVSSLIIR LLEKGFTVHA AIQNHGDESE LISKCDKKRL KAFCLDLFDY HSIIDALKGC CCLFYSFEPP KDHSATYDLW
101: YALSKTLAER TAWGLAMDRG IKMVSINSGL LMDDDLNIKN PYLKGAKEMY ENGVLVSVDV DFLVYAHICV YEDVSSYGRY LCFNHIINTI NDAINLANNF
201: NISPLPSPPP SFEKDTKIIQ QRISNKKLNK IMIKKIDDI
101: YALSKTLAER TAWGLAMDRG IKMVSINSGL LMDDDLNIKN PYLKGAKEMY ENGVLVSVDV DFLVYAHICV YEDVSSYGRY LCFNHIINTI NDAINLANNF
201: NISPLPSPPP SFEKDTKIIQ QRISNKKLNK IMIKKIDDI
001: MNQEKTISCC CVLDASTYVG FWILKRLLTR GYSVHAAIRK NGESVLEEKI RDMEANEERL EVYDVDVLDY QSILISLNNC NAVFCCLDNP EGYDEEKEVD
101: LEVRGAINVV EACARTESIE KIVFSSSLTA AIWRDNIGTQ KDVDEKCWSD LDFCLKKKLW HALAKTQSEK AAWALAMDRM VNMVSVNPGL IVGPSVAQHN
201: PRPTMSYLKG AAQMYENGVL AYVDVEFVAD VHIRAFEDTS ACGRYFCFNQ IVNTEEEALK LVQTLSPLIP MPPRHEKEMQ GSEVYEERLR NKKLNKLVEA
301: GFAC
101: LEVRGAINVV EACARTESIE KIVFSSSLTA AIWRDNIGTQ KDVDEKCWSD LDFCLKKKLW HALAKTQSEK AAWALAMDRM VNMVSVNPGL IVGPSVAQHN
201: PRPTMSYLKG AAQMYENGVL AYVDVEFVAD VHIRAFEDTS ACGRYFCFNQ IVNTEEEALK LVQTLSPLIP MPPRHEKEMQ GSEVYEERLR NKKLNKLVEA
301: GFAC
Arabidopsis Description
At2g23910 [Source:UniProtKB/TrEMBL;Acc:O82219]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.