Factsheet for Solyc03g097170.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400008172	Potato	cytosol	92.07	88.05
VIT_16s0039g01670.t01	Wine grape	cytosol	59.45	62.5
Solyc08g076790.2.1	Tomato	cytosol	57.01	59.37
Solyc06g061280.2.1	Tomato	cytosol, plastid	55.49	58.52
GSMUA_Achr4P28860_001	Banana	plastid	49.09	53.49
GSMUA_Achr5P03490_001	Banana	plastid	48.78	51.45
GSMUA_Achr4P16990_001	Banana	cytosol	46.34	50.33
TraesCS1B01G209700.1	Wheat	cytosol	45.43	48.53
Os10t0576900-01	Rice	cytosol	46.95	48.28
TraesCS1D01G198500.1	Wheat	cytosol	45.12	48.05
TraesCS1A01G194900.1	Wheat	cytosol	44.82	47.57
GSMUA_Achr3P03360_001	Banana	cytosol	46.34	46.06
EER94430	Sorghum	cytosol	46.34	45.92
Zm00001d030090_P001	Maize	cytosol, plastid	45.73	45.87
Zm00001d034716_P001	Maize	cytosol, nucleus, peroxisome	29.88	44.75
Zm00001d051557_P001	Maize	plastid	27.13	43.84
AT2G23910.1	Thale cress	cytosol	38.41	41.45
Bra032137.1-P	Field mustard	cytosol	38.11	41.25
CDY65186	Canola	cytosol	37.8	40.92
CDY39681	Canola	cytosol	37.8	40.92
CDX72244	Canola	cytosol	37.8	40.92
Bra024073.1-P	Field mustard	cytosol	37.8	40.92
AT4G30470.1	Thale cress	cytosol	37.8	40.92
CDY39207	Canola	cytosol, extracellular, nucleus	13.41	34.11
Solyc02g089770.2.1	Tomato	cytosol	28.66	27.41
Solyc02g086770.2.1	Tomato	cytosol	29.27	26.67
Solyc08g005120.2.1	Tomato	plastid	2.13	2.93

Protein Annotations

EnsemblPlants:Solyc03g097170.2.1	EnsemblPlantsGene:Solyc03g097170.2	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0003854
GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016491
GO:GO:0016616	GO:GO:0055114	InterPro:3Beta_OHSteriod_DH/Estase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF428
PFAM:PF01073	SUPFAM:SSF51735	UniParc:UPI00027681AA	UniProt:K4BJD4	MapMan:35.1	:

Description

No Description!

Coordinates

chr3:+:59493895..59496985

Molecular Weight (calculated)

36926.7 Da

IEP (calculated)

5.212

GRAVY (calculated)

-0.280

Length

328 amino acids

Sequence
(BLAST)

001: MTIAADFYDE QDSVFCSKRV CVMDAAGHLG SAIVHQLLLR GYTVHAAFQN HDEMQCFKRK YGCANDDSKS KKLICFHADP LDYHSIVDAL KGCCGLFYSF
101: ETPSDYPTYD ELMGEMEVRA AHNVMEACAQ TDTLNKVVFT SSATAVLWGT RKRDQHDSPE ASYSHSYVDE RDWTDINFCK KYKLWHGLSK TQAEKAAWAL
201: AMDRDVNMVS INAGLLIHPD LNIREPYLKG AAEMYEDGVF VAVDLKFLVD AHMCVFEDVS SYGRYLCFNR VINNTKDATT LANMLLPPSA SSGTQSLEDD
301: TVYEQRISNK KLNKLMLGFD TGLEVQVN

Best Arabidopsis Sequence Match ( AT2G23910.1 )
(BLAST)

001: MNQEKTISCC CVLDASTYVG FWILKRLLTR GYSVHAAIRK NGESVLEEKI RDMEANEERL EVYDVDVLDY QSILISLNNC NAVFCCLDNP EGYDEEKEVD
101: LEVRGAINVV EACARTESIE KIVFSSSLTA AIWRDNIGTQ KDVDEKCWSD LDFCLKKKLW HALAKTQSEK AAWALAMDRM VNMVSVNPGL IVGPSVAQHN
201: PRPTMSYLKG AAQMYENGVL AYVDVEFVAD VHIRAFEDTS ACGRYFCFNQ IVNTEEEALK LVQTLSPLIP MPPRHEKEMQ GSEVYEERLR NKKLNKLVEA
301: GFAC

Arabidopsis Description

At2g23910 [Source:UniProtKB/TrEMBL;Acc:O82219]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.