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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_02s0012g01570.t01 Wine grape extracellular 61.86 66.32
Solyc03g097170.2.1 Tomato cytosol 62.5 59.45
PGSC0003DMT400008172 Potato cytosol 62.82 57.14
GSMUA_Achr4P28860_001 Banana plastid 54.17 56.15
GSMUA_Achr5P03490_001 Banana plastid 54.17 54.34
GSMUA_Achr4P16990_001 Banana cytosol 50.64 52.32
TraesCS1B01G209700.1 Wheat cytosol 50.32 51.14
TraesCS1A01G194900.1 Wheat cytosol 50.32 50.81
TraesCS1D01G198500.1 Wheat cytosol 50.0 50.65
Os10t0576900-01 Rice cytosol 51.28 50.16
GSMUA_Achr3P03360_001 Banana cytosol 50.64 47.88
Zm00001d030090_P001 Maize cytosol, plastid 49.04 46.79
Zm00001d051557_P001 Maize plastid 30.13 46.31
EER94430 Sorghum cytosol 49.04 46.22
Zm00001d034716_P001 Maize cytosol, nucleus, peroxisome 31.73 45.21
VIT_11s0037g01030.t01 Wine grape cytosol 40.06 43.4
VIT_14s0083g00320.t01 Wine grape cytosol 33.33 29.13
VIT_14s0066g01150.t01 Wine grape cytosol 32.05 27.7
Protein Annotations
EntrezGene:100257919wikigene:100257919Gene3D:3.40.50.720MapMan:35.1ProteinID:CCB50587ProteinID:CCB50587.1
UniProt:F6HEE1EMBL:FN595750GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004611
GO:GO:0005488GO:GO:0005575GO:GO:0005975GO:GO:0006094GO:GO:0006139GO:GO:0006364
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0017076GO:GO:0032040
EntrezGene:LOC100257919wikigene:LOC100257919InterPro:NAD(P)-bd_domInterPro:NAD(P)-bd_dom_sfPFAM:PF13460PANTHER:PTHR10366
PANTHER:PTHR10366:SF428SUPFAM:SSF51735TIGR:TC63412UniParc:UPI0002108D80ArrayExpress:VIT_16s0039g01670EnsemblPlantsGene:VIT_16s0039g01670
EnsemblPlants:VIT_16s0039g01670.t01unigene:Vvi.3082RefSeq:XP_002272449RefSeq:XP_002272449.1RefSeq:XP_002272488RefSeq:XP_002272488.1
SEG:seg:::::
Description
No Description!
Coordinates
chr16:-:1288449..1293824
Molecular Weight (calculated)
35003.5 Da
IEP (calculated)
5.213
GRAVY (calculated)
-0.240
Length
312 amino acids
Sequence
(BLAST)
001: MAPSSLPDEV ISEKTVCVMD ASGRVGSALV RRLLRRGYTV HAALHGEYEI VEGVCCNKKK LRVFPADPLD YHSIMDALKG CSALFYSFEP PSDHPNYDEY
101: MADVEVRAAH NVLEACAQTD TIEKVVFTSS ITAVIWRDDR NSTPSDLDER NWSDVNFCRK FKLWHGVSKT LAERTAWALA MDRGVNMVSI NGGLLMADHL
201: TISNPYLKGA AEMFEDGVFV TVDLNFLVDA HISVFEDSSS YGRYLCFNHV INSNQDAIHL ANMLLPPSQS TPPPQSLSTK DNLEDTRVYQ QRISNKKLNK
301: LMVDFRSEVE VE
Best Arabidopsis Sequence Match ( AT2G23910.1 )
(BLAST)
001: MNQEKTISCC CVLDASTYVG FWILKRLLTR GYSVHAAIRK NGESVLEEKI RDMEANEERL EVYDVDVLDY QSILISLNNC NAVFCCLDNP EGYDEEKEVD
101: LEVRGAINVV EACARTESIE KIVFSSSLTA AIWRDNIGTQ KDVDEKCWSD LDFCLKKKLW HALAKTQSEK AAWALAMDRM VNMVSVNPGL IVGPSVAQHN
201: PRPTMSYLKG AAQMYENGVL AYVDVEFVAD VHIRAFEDTS ACGRYFCFNQ IVNTEEEALK LVQTLSPLIP MPPRHEKEMQ GSEVYEERLR NKKLNKLVEA
301: GFAC
Arabidopsis Description
At2g23910 [Source:UniProtKB/TrEMBL;Acc:O82219]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.