Factsheet for TraesCS1A01G194900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G198500.1	Wheat	cytosol	97.09	97.4
TraesCS1B01G209700.1	Wheat	cytosol	94.5	95.11
Zm00001d030090_P001	Maize	cytosol, plastid	74.11	70.03
EER94430	Sorghum	cytosol	74.76	69.79
Zm00001d051557_P001	Maize	plastid	43.37	66.01
Os10t0576900-01	Rice	cytosol	67.96	65.83
GSMUA_Achr4P28860_001	Banana	plastid	60.19	61.79
GSMUA_Achr4P16990_001	Banana	cytosol	58.25	59.6
Zm00001d034716_P001	Maize	cytosol, nucleus, peroxisome	42.07	59.36
GSMUA_Achr5P03490_001	Banana	plastid	58.9	58.52
KRH39555	Soybean	cytosol	53.07	54.85
VIT_02s0012g01570.t01	Wine grape	extracellular	51.46	54.64
GSMUA_Achr3P03360_001	Banana	cytosol	57.93	54.24
KRH74401	Soybean	cytosol	52.1	53.85
KRH45421	Soybean	cytosol	50.16	52.19
PGSC0003DMT400019823	Potato	cytosol, plastid	51.46	50.64
VIT_16s0039g01670.t01	Wine grape	cytosol	50.81	50.32
Solyc08g076790.2.1	Tomato	cytosol	51.13	50.16
Solyc06g061280.2.1	Tomato	cytosol, plastid	50.16	49.84
Solyc03g097170.2.1	Tomato	cytosol	47.57	44.82
PGSC0003DMT400008172	Potato	cytosol	47.57	42.86
AT2G23910.1	Thale cress	cytosol	40.13	40.79
Bra024073.1-P	Field mustard	cytosol	39.16	39.93
CDX72244	Canola	cytosol	39.16	39.93
AT4G30470.1	Thale cress	cytosol	38.84	39.6
CDY65186	Canola	cytosol	38.51	39.27
Bra032137.1-P	Field mustard	cytosol	38.51	39.27
CDY39681	Canola	cytosol	38.51	39.27
CDY39207	Canola	cytosol, extracellular, nucleus	13.92	33.33
TraesCS1A01G417800.1	Wheat	cytosol, peroxisome, plastid	32.36	27.4
TraesCS3A01G229700.1	Wheat	cytosol	32.04	26.83
PGSC0003DMT400045216	Potato	plastid	48.22	26.56

Protein Annotations

EnsemblPlants:TraesCS1A01G194900.1	EnsemblPlantsGene:TraesCS1A01G194900	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366
PANTHER:PTHR10366:SF428	PFAM:PF13460	SEG:seg	SUPFAM:SSF51735	TIGR:cd08958	MapMan:35.1

Description

No Description!

Coordinates

chr1A:-:351883304..351886061

Molecular Weight (calculated)

33709.3 Da

IEP (calculated)

5.174

GRAVY (calculated)

-0.009

Length

309 amino acids

Sequence
(BLAST)

001: MCPGAPVAAA ASDKSVCVMD ASGPLGQALV HRLLRRGYTV HATTYGRSLD ALALLAAAGH DEDRLKLFRA DPFDYHSIAD AVRGCSGLFC MFNTHEDQAG
101: CDEVMVEVEV RAAQNVLEAC AQTVTMERVV FTSSVTAVVW KDDDHKPVDA FDERNWSDLN LCRKRKLWHA LAKTLSEKTA WALAMDRGVD MVAINAGLLT
201: GPGLSSAHPC LKGVPEMYEH GVLVTVDADF LADAHVAAYE CPTAFGRYLC FNNVVCRPED ALQFAQMLTP SAPCYPPSDE LKVIPQRIQN KKLNNLMVEF
301: ASAIYGDLD

Best Arabidopsis Sequence Match ( AT2G23910.1 )
(BLAST)

001: MNQEKTISCC CVLDASTYVG FWILKRLLTR GYSVHAAIRK NGESVLEEKI RDMEANEERL EVYDVDVLDY QSILISLNNC NAVFCCLDNP EGYDEEKEVD
101: LEVRGAINVV EACARTESIE KIVFSSSLTA AIWRDNIGTQ KDVDEKCWSD LDFCLKKKLW HALAKTQSEK AAWALAMDRM VNMVSVNPGL IVGPSVAQHN
201: PRPTMSYLKG AAQMYENGVL AYVDVEFVAD VHIRAFEDTS ACGRYFCFNQ IVNTEEEALK LVQTLSPLIP MPPRHEKEMQ GSEVYEERLR NKKLNKLVEA
301: GFAC

Arabidopsis Description

At2g23910 [Source:UniProtKB/TrEMBL;Acc:O82219]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.