CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74401	Soybean	cytosol	70.37	69.9
KRH39555	Soybean	cytosol	69.7	69.23
VIT_02s0012g01570.t01	Wine grape	extracellular	64.65	65.98
PGSC0003DMT400019823	Potato	cytosol, plastid	61.28	57.96
Solyc06g061280.2.1	Tomato	cytosol, plastid	59.93	57.23
Solyc08g076790.2.1	Tomato	cytosol	59.93	56.51
GSMUA_Achr4P28860_001	Banana	plastid	54.21	53.49
GSMUA_Achr4P16990_001	Banana	cytosol	52.53	51.66
TraesCS1B01G209700.1	Wheat	cytosol	52.19	50.49
TraesCS1D01G198500.1	Wheat	cytosol	52.19	50.32
TraesCS1A01G194900.1	Wheat	cytosol	52.19	50.16
GSMUA_Achr5P03490_001	Banana	plastid	52.19	49.84
GSMUA_Achr3P03360_001	Banana	cytosol	53.54	48.18
Os10t0576900-01	Rice	cytosol	49.49	46.08
EER94430	Sorghum	cytosol	51.18	45.92
Zm00001d030090_P001	Maize	cytosol, plastid	50.17	45.57
Zm00001d034716_P001	Maize	cytosol, nucleus, peroxisome	32.66	44.29
Zm00001d051557_P001	Maize	plastid	29.63	43.35
CDY65186	Canola	cytosol	41.08	40.26
CDY39681	Canola	cytosol	41.08	40.26
Bra032137.1-P	Field mustard	cytosol	41.08	40.26
AT2G23910.1	Thale cress	cytosol	41.08	40.13
CDX72244	Canola	cytosol	40.74	39.93
Bra024073.1-P	Field mustard	cytosol	40.74	39.93
AT4G30470.1	Thale cress	cytosol	40.4	39.6
KRG93279	Soybean	cytosol	23.91	33.33
CDY39207	Canola	cytosol, extracellular, nucleus	14.14	32.56
KRH56594	Soybean	cytosol	28.62	31.72
PGSC0003DMT400045216	Potato	plastid	56.9	30.12
KRG93276	Soybean	cytosol	32.32	26.52

Protein Annotations

EMBL:ACUP02005217	EnsemblPlants:KRH45421	EnsemblPlantsGene:GLYMA_08G270600	EntrezGene:100783579	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF495	PFAM:PF13460	ProteinID:KRH45421	ProteinID:KRH45421.1
SUPFAM:SSF51735	UniParc:UPI00023CA49E	UniProt:I1KX15	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr8:+:35109679..35121678

Molecular Weight (calculated)

33492.6 Da

IEP (calculated)

5.306

GRAVY (calculated)

-0.252

Length

297 amino acids

Sequence
(BLAST)

001: MAPSFDQSAS TVCVMDASGQ LGASLVQQLL LRGYHVHASV QSHGNEQLNG ISADPNRLKI FHLDPFDYHS ITDALRGCSG LFYVFEPPQD QPYYDEYIAD
101: VEVRAAHNVI EACAQTETID KVVFTSSATA VVWREDRKAM ESNMDEKHWS DINFCRKFKL WHGMSKTMAE RTAWALAMDR EVNMVSINAG LLMSSDQHQD
201: LCIQKNPYLR GASEMYEDGV LVTVDLGILV DTHICVYEDI SSYGRYLCFN HVINTQHDAV QLAHKTTTPL SCDPGKEFIQ QRISNKKLNE LMVNFVS

Best Arabidopsis Sequence Match ( AT2G23910.1 )
(BLAST)

001: MNQEKTISCC CVLDASTYVG FWILKRLLTR GYSVHAAIRK NGESVLEEKI RDMEANEERL EVYDVDVLDY QSILISLNNC NAVFCCLDNP EGYDEEKEVD
101: LEVRGAINVV EACARTESIE KIVFSSSLTA AIWRDNIGTQ KDVDEKCWSD LDFCLKKKLW HALAKTQSEK AAWALAMDRM VNMVSVNPGL IVGPSVAQHN
201: PRPTMSYLKG AAQMYENGVL AYVDVEFVAD VHIRAFEDTS ACGRYFCFNQ IVNTEEEALK LVQTLSPLIP MPPRHEKEMQ GSEVYEERLR NKKLNKLVEA
301: GFAC

Arabidopsis Description

At2g23910 [Source:UniProtKB/TrEMBL;Acc:O82219]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.