Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400026192 | Potato | cytosol | 93.88 | 93.88 |
VIT_14s0083g00320.t01 | Wine grape | cytosol | 59.18 | 56.86 |
Solyc08g076790.2.1 | Tomato | cytosol | 31.49 | 34.29 |
Solyc02g086770.2.1 | Tomato | cytosol | 35.86 | 34.17 |
Solyc06g061280.2.1 | Tomato | cytosol, plastid | 29.74 | 32.8 |
Solyc03g097170.2.1 | Tomato | cytosol | 27.41 | 28.66 |
Solyc08g005120.2.1 | Tomato | plastid | 1.75 | 2.51 |
Protein Annotations
Gene3D:3.40.50.720 | MapMan:35.1 | InterPro:3Beta_OHSteriod_DH/Estase | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0003854 | GO:GO:0006629 | GO:GO:0006694 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0016491 | GO:GO:0016616 | GO:GO:0055114 | UniProt:K4BCC8 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF01073 |
PANTHER:PTHR10366 | PANTHER:PTHR10366:SF445 | SUPFAM:SSF51735 | EnsemblPlantsGene:Solyc02g089770.2 | EnsemblPlants:Solyc02g089770.2.1 | UniParc:UPI0002768C68 |
Description
No Description!
Coordinates
chr2:+:51477583..51480846
Molecular Weight (calculated)
38338.4 Da
IEP (calculated)
7.437
GRAVY (calculated)
-0.103
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVAISLELE PLKQRNDHGM FFSSGNFICS LNARDRKIVC VTGGNSYFGS HLIKKLLAYG YLVRVIIQNQ ANLEDMKELM REEMKQLESV VVARMDDLDS
101: LCNAFRGCHV VFHTSSFIDP RGISGYTERM AFIEAEAAKN VIEACGRAAH VKRCVFTSSL LACIWKNDLP NLIDESSWSD ETFCREHKLW VALAKTRAEK
201: AAWWKAREMK VKLVTVCPGL LMAPSFPNAH LETSVPYLKG GDFMLRQGTL ATEDASKVAE AHIYVYEDMD YGGCGRYICF GKIVGTLEEA IQLENGLNIG
301: GHLSGYQSPL AVAVDNNEIP PKITKSKLSR LLFHASQRLP CKQ
101: LCNAFRGCHV VFHTSSFIDP RGISGYTERM AFIEAEAAKN VIEACGRAAH VKRCVFTSSL LACIWKNDLP NLIDESSWSD ETFCREHKLW VALAKTRAEK
201: AAWWKAREMK VKLVTVCPGL LMAPSFPNAH LETSVPYLKG GDFMLRQGTL ATEDASKVAE AHIYVYEDMD YGGCGRYICF GKIVGTLEEA IQLENGLNIG
301: GHLSGYQSPL AVAVDNNEIP PKITKSKLSR LLFHASQRLP CKQ
001: MRIVRATETF SAELKEFMCA AVQRRKDDDG FRGSRGGGKS RNAMDLDSDA GNRLVCVTGG VSYLGRAIVK RLLVHGYSVR IVVDCPEDKE KVSEMEADAE
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES
Arabidopsis Description
Cinnamoyl CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.