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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400026192 Potato cytosol 93.88 93.88
VIT_14s0083g00320.t01 Wine grape cytosol 59.18 56.86
Solyc08g076790.2.1 Tomato cytosol 31.49 34.29
Solyc02g086770.2.1 Tomato cytosol 35.86 34.17
Solyc06g061280.2.1 Tomato cytosol, plastid 29.74 32.8
Solyc03g097170.2.1 Tomato cytosol 27.41 28.66
Solyc08g005120.2.1 Tomato plastid 1.75 2.51
Protein Annotations
Gene3D:3.40.50.720MapMan:35.1InterPro:3Beta_OHSteriod_DH/Estasencoils:CoilGO:GO:0003674GO:GO:0003824
GO:GO:0003854GO:GO:0006629GO:GO:0006694GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0016491GO:GO:0016616GO:GO:0055114UniProt:K4BCC8InterPro:NAD(P)-bd_dom_sfPFAM:PF01073
PANTHER:PTHR10366PANTHER:PTHR10366:SF445SUPFAM:SSF51735EnsemblPlantsGene:Solyc02g089770.2EnsemblPlants:Solyc02g089770.2.1UniParc:UPI0002768C68
Description
No Description!
Coordinates
chr2:+:51477583..51480846
Molecular Weight (calculated)
38338.4 Da
IEP (calculated)
7.437
GRAVY (calculated)
-0.103
Length
343 amino acids
Sequence
(BLAST)
001: MDVAISLELE PLKQRNDHGM FFSSGNFICS LNARDRKIVC VTGGNSYFGS HLIKKLLAYG YLVRVIIQNQ ANLEDMKELM REEMKQLESV VVARMDDLDS
101: LCNAFRGCHV VFHTSSFIDP RGISGYTERM AFIEAEAAKN VIEACGRAAH VKRCVFTSSL LACIWKNDLP NLIDESSWSD ETFCREHKLW VALAKTRAEK
201: AAWWKAREMK VKLVTVCPGL LMAPSFPNAH LETSVPYLKG GDFMLRQGTL ATEDASKVAE AHIYVYEDMD YGGCGRYICF GKIVGTLEEA IQLENGLNIG
301: GHLSGYQSPL AVAVDNNEIP PKITKSKLSR LLFHASQRLP CKQ
Best Arabidopsis Sequence Match ( AT5G14700.1 )
(BLAST)
001: MRIVRATETF SAELKEFMCA AVQRRKDDDG FRGSRGGGKS RNAMDLDSDA GNRLVCVTGG VSYLGRAIVK RLLVHGYSVR IVVDCPEDKE KVSEMEADAE
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES
Arabidopsis Description
Cinnamoyl CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.