Factsheet for Os01t0639200-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0611800-01
Os04t0500700-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14700.1	Os02t0611800-01	AT5G48930.1	21798944
AT5G14700.1	Os04t0500700-02	AT5G48930.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87211	Sorghum	cytosol	65.96	88.65
Zm00001d044104_P001	Maize	cytosol	82.59	84.14
TraesCS3A01G229700.1	Wheat	cytosol	81.53	83.74
HORVU3Hr1G057200.1	Barley	cytosol	82.59	83.69
TraesCS3B01G259000.1	Wheat	cytosol, peroxisome, plastid	81.0	82.53
TraesCS3D01G223500.1	Wheat	cytosol	80.74	82.04
Zm00001d011446_P001	Maize	cytosol	80.47	80.05
Os05t0578500-01	Rice	cytosol	75.73	75.73
KXG22093	Sorghum	cytosol	19.26	70.87
KRH56594	Soybean	cytosol	34.3	48.51
KRG93279	Soybean	cytosol	26.65	47.42
Bra008743.1-P	Field mustard	cytosol	43.01	44.29
VIT_14s0066g01150.t01	Wine grape	cytosol	41.95	44.04
CDX69564	Canola	cytosol	42.74	44.02
KRG93276	Soybean	cytosol	41.95	43.92
CDY09878	Canola	cytosol	42.48	43.75
AT5G14700.1	Thale cress	cytosol	42.22	43.48
Bra023481.1-P	Field mustard	cytosol	41.16	42.51
CDX85588	Canola	cytosol	41.16	42.39
CDX91029	Canola	cytosol	40.9	42.23
Os10t0576900-01	Rice	cytosol	28.23	33.54

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	InterPro:3Beta_OHSteriod_DH/Estase	EntrezGene:4326581	ProteinID:BAD68587.1	ProteinID:BAD68588.1
ProteinID:BAD68953.1	ProteinID:BAD68954.1	ProteinID:BAF05588.1	ProteinID:BAS73357.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0003854	GO:GO:0006629	GO:GO:0006694	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009605	GO:GO:0009607	GO:GO:0009809	GO:GO:0009987
GO:GO:0016491	GO:GO:0016616	GO:GO:0019748	GO:GO:0042742	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf
EnsemblPlantsGene:Os01g0639200	EnsemblPlants:Os01t0639200-01	PFAM:PF01073	PANTHER:PTHR10366	PANTHER:PTHR10366:SF567	UniProt:Q0JKZ0
SUPFAM:SSF51735	UniParc:UPI00000A19B6	RefSeq:XP_015621328.1	SEG:seg	:	:

Description

suppressor of BTH-induced, NH1-mediated lesion mimic 6Cinnamoyl-CoA reductase-like gene family member, Defense response (Os01t0639200-01)

Coordinates

chr1:-:25640719..25647590

Molecular Weight (calculated)

41262.9 Da

IEP (calculated)

7.673

GRAVY (calculated)

-0.254

Length

379 amino acids

Sequence
(BLAST)

001: MGVLRSTQSM QAEVEEMRAA LLHGHGGGAA AAAAAGWRPS AGDADVKRTA GGDGGAAGPR TVCVTGGISF VGFAVVDRLL RHGYTVRLAL ETQEDLDKLR
101: EMEMFGEDGR DGVWTVMANV TDPESLHRAF DGCAGVFHTS AFVDPGGMSG YTKHMASLEA KAAEQVIEAC VRTESVRKCV FTSSLLACVW RQNYPHDRRF
201: PTIIDENCWS DESFCRDNKL WFALGKTAAE KTAWRAARGR DLKLVTVCPA LVTGPGFRRR NSTASIAYLK GARAMLADGL LATASVETVA EAHVRVYEAM
301: GDNTAGGRYI CYDHVVKRPE EFAELERQLG IPRRAAAAAA AQDSGDRPAR FDLCRQKLAR LMSTRRRCTY DDYYSVAFD

Best Arabidopsis Sequence Match ( AT5G14700.1 )
(BLAST)

001: MRIVRATETF SAELKEFMCA AVQRRKDDDG FRGSRGGGKS RNAMDLDSDA GNRLVCVTGG VSYLGRAIVK RLLVHGYSVR IVVDCPEDKE KVSEMEADAE
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES

Arabidopsis Description

Cinnamoyl CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.