Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G14700.1 | EES05411 | AT5G48930.1 | 21798944 |
| AT5G14700.1 | EES11073 | AT5G48930.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU87211 | Sorghum | cytosol | 91.26 | 33.33 |
| Zm00001d044104_P001 | Maize | cytosol | 87.38 | 24.19 |
| Zm00001d011446_P001 | Maize | cytosol | 86.41 | 23.36 |
| TraesCS3B01G259000.1 | Wheat | cytosol, peroxisome, plastid | 74.76 | 20.7 |
| TraesCS3A01G229700.1 | Wheat | cytosol | 70.87 | 19.78 |
| TraesCS3D01G223500.1 | Wheat | cytosol | 70.87 | 19.57 |
| HORVU3Hr1G057200.1 | Barley | cytosol | 70.87 | 19.52 |
| Os01t0639200-01 | Rice | cytosol | 70.87 | 19.26 |
| EES18736 | Sorghum | cytosol | 66.02 | 18.53 |
| KRG93279 | Soybean | cytosol | 32.04 | 15.49 |
| KRH56594 | Soybean | cytosol | 33.98 | 13.06 |
| VIT_14s0066g01150.t01 | Wine grape | cytosol | 33.98 | 9.7 |
| KRG93276 | Soybean | cytosol | 32.04 | 9.12 |
| CDY09878 | Canola | cytosol | 30.1 | 8.42 |
| CDX69564 | Canola | cytosol | 30.1 | 8.42 |
| Bra008743.1-P | Field mustard | cytosol | 30.1 | 8.42 |
| EER94430 | Sorghum | cytosol | 26.21 | 8.16 |
| AT5G14700.1 | Thale cress | cytosol | 29.13 | 8.15 |
| CDX91029 | Canola | cytosol | 26.21 | 7.36 |
| Bra023481.1-P | Field mustard | cytosol | 26.21 | 7.36 |
| CDX85588 | Canola | cytosol | 26.21 | 7.34 |
Protein Annotations
| EnsemblPlants:KXG22093 | EnsemblPlantsGene:SORBI_3009G151500 | Gene3D:3.40.50.720 | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF567 | ProteinID:KXG22093 |
| ProteinID:KXG22093.1 | SEG:seg | UniParc:UPI00081ABA9A | UniProt:A0A1B6P8V2 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr9:-:50781049..50781541
Molecular Weight (calculated)
11377.3 Da
IEP (calculated)
5.644
GRAVY (calculated)
-0.497
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MLADGLLATA NVETVAEAHV HAYEATGDNT AGGRYICYDH VVKRPEEFAE LDRQVGLPGG AAATQGSDDD RPARFELCKR KLSKLMSSRR RCTYETYYSV
101: AFD
101: AFD
001: MRIVRATETF SAELKEFMCA AVQRRKDDDG FRGSRGGGKS RNAMDLDSDA GNRLVCVTGG VSYLGRAIVK RLLVHGYSVR IVVDCPEDKE KVSEMEADAE
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES
Arabidopsis Description
Cinnamoyl CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.