Factsheet for Bra023481.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
golgi 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra033526.1-P
Bra036480.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14700.1	Bra033526.1-P	AT5G48930.1	21798944
AT5G14700.1	Bra036480.1-P	AT5G48930.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85588	Canola	cytosol	100.0	99.73
Bra008743.1-P	Field mustard	cytosol	85.56	85.33
AT5G14700.1	Thale cress	cytosol	85.01	84.78
KRH56594	Soybean	cytosol	38.15	52.24
KRG93279	Soybean	cytosol	29.97	51.64
KRG93276	Soybean	cytosol	48.5	49.17
VIT_14s0066g01150.t01	Wine grape	cytosol	47.96	48.75
PGSC0003DMT400001401	Potato	cytosol	46.32	47.22
Solyc02g086770.2.1	Tomato	cytosol	45.78	46.67
OQU87211	Sorghum	cytosol	34.6	45.04
GSMUA_Achr6P23260_001	Banana	cytosol	42.51	42.98
TraesCS1A01G417800.1	Wheat	cytosol, peroxisome, plastid	42.51	42.74
Zm00001d044104_P001	Maize	cytosol	43.05	42.47
TraesCS3B01G259000.1	Wheat	cytosol, peroxisome, plastid	42.78	42.2
Zm00001d009666_P001	Maize	cytosol	42.78	42.09
HORVU3Hr1G057200.1	Barley	cytosol	42.78	41.98
TraesCS3A01G229700.1	Wheat	cytosol	41.96	41.73
TraesCS3D01G223500.1	Wheat	cytosol	42.23	41.55
TraesCS1B01G447900.1	Wheat	cytosol, peroxisome, plastid	42.23	41.44
EES18736	Sorghum	cytosol	41.42	41.42
Os01t0639200-01	Rice	cytosol	42.51	41.16
GSMUA_Achr5P09070_001	Banana	cytosol, mitochondrion	40.33	40.88
Zm00001d011446_P001	Maize	cytosol	41.69	40.16
Os05t0578500-01	Rice	cytosol	41.14	39.84
HORVU1Hr1G091400.1	Barley	cytosol	26.98	39.13
Bra024073.1-P	Field mustard	cytosol	27.79	33.66
Bra032137.1-P	Field mustard	cytosol	26.43	32.01
TraesCS1D01G425400.2	Wheat	cytosol	34.88	31.6
GSMUA_Achr9P07010_001	Banana	cytosol	33.79	30.17
GSMUA_Achr6P27330_001	Banana	cytosol	26.16	28.57
KXG22093	Sorghum	cytosol	7.36	26.21
HORVU1Hr1G091350.2	Barley	cytosol, plastid	18.26	25.09

Protein Annotations

EnsemblPlants:Bra023481.1	EnsemblPlants:Bra023481.1-P	EnsemblPlantsGene:Bra023481	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF483
PFAM:PF01370	SEG:seg	SUPFAM:SSF51735	UniParc:UPI00025435D2	UniProt:M4E3X8	MapMan:35.1

Description

AT5G14700 (E=1e-173) | cinnamoyl-CoA reductase-related

Coordinates

chrA02:-:3553170..3558193

Molecular Weight (calculated)

40407.1 Da

IEP (calculated)

7.026

GRAVY (calculated)

-0.292

Length

367 amino acids

Sequence
(BLAST)

001: MRIVRSSEKF SAELKEFMCA AVQRRRDDDG FRGSRGGKSR NAMDLDSDNG NRLVCVTGGV SYLGRAIVKR LLVHGYSVRI VVDCPEDKEK VSEMEADAET
101: ASFGNRITSV VSRLTETESL IKAFDGCDGV FHTAAFVDPA GISGYSKSMA ELEAKVSENV IEACTRTGSV RKCVFTSSLL ACALKDNSLN DLDHSIINEE
201: SWSDEQLCVH NKLWYALGKL KAEKAAWRIA DSKGLKLATI CPALITGPDF FQLNSTSTLA YLKGAKDMYR NRLLATMDVN RLAKVHVRLW EGLGNKTAFG
301: RYICFDTILS KDGAEKLAKD IGAQIEKICG SSDDSEENAE TSSTPQISDK KLLDLMSRTL RSCYHES

Best Arabidopsis Sequence Match ( AT5G14700.1 )
(BLAST)

001: MRIVRATETF SAELKEFMCA AVQRRKDDDG FRGSRGGGKS RNAMDLDSDA GNRLVCVTGG VSYLGRAIVK RLLVHGYSVR IVVDCPEDKE KVSEMEADAE
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES

Arabidopsis Description

Cinnamoyl CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.