Factsheet for Zm00001d009666_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003129_P001
Zm00001d017186_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14700.1	Zm00001d003129_P001	AT5G48930.1	21798944
AT5G14700.1	Zm00001d017186_P001	AT5G48930.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18736	Sorghum	cytosol	86.06	87.47
Zm00001d044104_P001	Maize	cytosol	72.92	73.12
Zm00001d011446_P001	Maize	cytosol	73.19	71.65
KRH56594	Soybean	cytosol	33.24	46.27
KRG93279	Soybean	cytosol	26.01	45.54
VIT_14s0066g01150.t01	Wine grape	cytosol	43.43	44.88
Bra008743.1-P	Field mustard	cytosol	43.16	43.75
AT5G14700.1	Thale cress	cytosol	43.16	43.75
CDX69564	Canola	cytosol	42.9	43.48
CDY09878	Canola	cytosol	42.63	43.21
Bra023481.1-P	Field mustard	cytosol	42.09	42.78
CDX91029	Canola	cytosol	42.09	42.78
CDX85588	Canola	cytosol	42.09	42.66
KRG93276	Soybean	cytosol	40.21	41.44
Zm00001d034716_P001	Maize	cytosol, nucleus, peroxisome	20.11	34.25
Zm00001d030090_P001	Maize	cytosol, plastid	27.35	31.19
Zm00001d051557_P001	Maize	plastid	16.62	30.54

Protein Annotations

EntrezGene:100280347	Gene3D:3.40.50.720	MapMan:35.1	InterPro:3Beta_OHSteriod_DH/Estase	ProteinID:AQK92386.1	UniProt:B8A3B8
EMBL:BT056060	GO:GO:0003674	GO:GO:0003824	GO:GO:0003854	GO:GO:0006629	GO:GO:0006694
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016491	GO:GO:0016616	GO:GO:0055114
InterPro:NAD(P)-bd_dom_sf	PFAM:PF01073	PANTHER:PTHR10366	PANTHER:PTHR10366:SF567	SUPFAM:SSF51735	UniParc:UPI00019177A5
EnsemblPlantsGene:Zm00001d009666	EnsemblPlants:Zm00001d009666_P001	EnsemblPlants:Zm00001d009666_T001	SEG:seg	:	:

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr8:+:75117321..75122209

Molecular Weight (calculated)

41072.1 Da

IEP (calculated)

7.458

GRAVY (calculated)

-0.257

Length

373 amino acids

Sequence
(BLAST)

001: MGVLRSTQSL EAEVEEMRGA LLLHGAWAWR PGGGAAKRAA RAVEPAAAEA RTVCVTGGTS FLGFAVVDRL LRHGYTVRLA LETQEDLDKL REMEMFGENG
101: RDGVWTVIAN VMDPESLHEA FDGCVGVFHT SSHVDPAGIS GYTKHMAGLE AKAAELVVEA CVRTESVRKC VLTSSLLACV WRQNYPHDRR RFPTTIDENC
201: WSDESLCRDN KLWLSLGKTM AEKAAWRAAR GTDLKLVTIC PALVTGPGFR RRNPTPSIAY LKGAHAMLVQ GLLATANVER VAEAHVRVYE ELSGTAGGRY
301: ICYDHVVRRG EEFAELQRQL GLRVPATATP DGYGGDDDDG RAPRFQLCNR KLAALMSARR RCTYDAYFPM PQE

Best Arabidopsis Sequence Match ( AT5G14700.1 )
(BLAST)

001: MRIVRATETF SAELKEFMCA AVQRRKDDDG FRGSRGGGKS RNAMDLDSDA GNRLVCVTGG VSYLGRAIVK RLLVHGYSVR IVVDCPEDKE KVSEMEADAE
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES

Arabidopsis Description

Cinnamoyl CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.