Factsheet for GSMUA_Achr5P09070_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 3
cytosol 2
golgi 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr4P01990_001
GSMUA_Achr5P04550_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14700.1	GSMUA_Achr10P...	AT5G48930.1	21798944
AT5G14700.1	GSMUA_Achr4P01990_001	AT5G48930.1	21798944
AT5G14700.1	GSMUA_Achr5P04550_001	AT5G48930.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P23260_001	Banana	cytosol	62.15	61.98
KRG93279	Soybean	cytosol	28.73	48.83
KRH56594	Soybean	cytosol	35.64	48.13
GSMUA_Achr9P07010_001	Banana	cytosol	49.72	43.8
KRG93276	Soybean	cytosol	43.65	43.65
VIT_14s0066g01150.t01	Wine grape	cytosol	42.82	42.94
GSMUA_Achr6P27330_001	Banana	cytosol	38.67	41.67
AT5G14700.1	Thale cress	cytosol	41.99	41.3
Bra023481.1-P	Field mustard	cytosol	40.88	40.33
CDX85588	Canola	cytosol	40.88	40.22
Bra008743.1-P	Field mustard	cytosol	40.33	39.67
CDX91029	Canola	cytosol	40.06	39.51
CDY09878	Canola	cytosol	40.06	39.4
CDX69564	Canola	cytosol	40.06	39.4
GSMUA_Achr5P03490_001	Banana	plastid	29.83	34.73
GSMUA_Achr4P16990_001	Banana	cytosol	27.9	33.44
GSMUA_Achr4P28860_001	Banana	plastid	27.35	32.89
GSMUA_Achr3P03360_001	Banana	cytosol	27.07	29.7

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	InterPro:3Beta_OHSteriod_DH/Estase	GO:GO:0003674	GO:GO:0003824	GO:GO:0003854
GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016491
GO:GO:0016616	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G09070_001	EnsemblPlants:GSMUA_Achr5P09070_001	EnsemblPlants:GSMUA_Achr5T09070_001	UniProt:M0SWY6
InterPro:NAD(P)-bd_dom_sf	PFAM:PF01073	PANTHER:PTHR10366	PANTHER:PTHR10366:SF567	SUPFAM:SSF51735	UniParc:UPI0002969150
SEG:seg	:	:	:	:	:

Description

Putative Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Source:GMGC_GENE;Acc:GSMUA_Achr5G09070_001]

Coordinates

chr5:+:6594253..6596416

Molecular Weight (calculated)

40088.1 Da

IEP (calculated)

8.381

GRAVY (calculated)

-0.207

Length

362 amino acids

Sequence
(BLAST)

001: MGALRRRVSA EELREVILRS CGVGGGCSGR KAGPGGVRRR TGGDGTGWEE GRVVCVTGAV SFVGSAIVRR LLARGYAVRL LVDTQEDLEK LREKEMFQGG
101: GVWAAAVANV MDLDSLCRAF DGCTAVFHSS SSVDPRGISG YSKHMVDVEV RATERVIEAC VRTESVRKCV FTSSLLACVW RQRDPCHARR ATIVDDNCWS
201: DETICRDRKL WFALGKTMAE KAAWRVARGR DLNLVTVCPA LVTGPGFQHL NPTGSIAYLK GAQYMFAEGL LATVDVEQLA DAHVSIYEAM NRNACGRYIC
301: YDHVIQTGEE AAELERQLRL PNRVRGATRE VDPTSFELSN RKLLELMNSR RRCTYDVYSY FP

Best Arabidopsis Sequence Match ( AT5G14700.1 )
(BLAST)

001: MRIVRATETF SAELKEFMCA AVQRRKDDDG FRGSRGGGKS RNAMDLDSDA GNRLVCVTGG VSYLGRAIVK RLLVHGYSVR IVVDCPEDKE KVSEMEADAE
101: TASFSNMITS VVSRLTEIDS LIKAFDGCAG VFHTSAFVDP AGVSGYSKSM AELEAKVSES VIEACTRTAS VRKCVFTSSL LACAWQKNPC NSLDHSVINE
201: ESWSDEQLCI DNKLWYALGK LKAEKAAWRI ADSKGLKLAT ICPALITGPD FFNRNSTSTL AYLKGAKEMY SNGLLATMDV NRLAKAHVCL WEGLGNKTAF
301: GRYICFDTIL SRDGAEKLAK DIDVQIEKIC GNSNDSDANT ETEASLQISD KKLLDLMSRT LRSCYHES

Arabidopsis Description

Cinnamoyl CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.