Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- extracellular 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU81054 | Sorghum | cytosol, extracellular, nucleus | 63.75 | 62.45 |
| Zm00001d000176_P001 | Maize | nucleus | 40.83 | 40.0 |
| GSMUA_Achr5P13470_001 | Banana | nucleus | 30.0 | 39.13 |
| Os07t0261200-01 | Rice | nucleus | 41.25 | 38.52 |
| GSMUA_Achr5P15400_001 | Banana | nucleus | 27.08 | 37.57 |
| Zm00001d029885_P001 | Maize | cytosol, nucleus, plastid | 38.33 | 32.51 |
| TraesCS5A01G541200.1 | Wheat | nucleus | 26.67 | 30.19 |
| TraesCS4B01G372700.1 | Wheat | mitochondrion, nucleus | 26.67 | 30.05 |
| TraesCS4D01G364400.1 | Wheat | nucleus | 26.25 | 29.72 |
| TraesCS4D01G364500.1 | Wheat | mitochondrion, nucleus | 26.25 | 29.72 |
| GSMUA_Achr4P30370_001 | Banana | nucleus | 34.58 | 29.12 |
| TraesCS5A01G541300.1 | Wheat | nucleus | 24.17 | 28.16 |
Protein Annotations
| EntrezGene:103641424 | MapMan:35.1 | ProteinID:AGW42802.1 | ProteinID:AGW42804.1 | ProteinID:AGW42805.1 | ProteinID:AGW42806.1 |
| ProteinID:AGW42810.1 | ProteinID:AGW42814.1 | ProteinID:AGW42816.1 | ProteinID:AGW42828.1 | ProteinID:AGW42829.1 | ProteinID:AGW42830.1 |
| ProteinID:AGW42831.1 | ProteinID:AGW42833.1 | ProteinID:AGW42834.1 | ProteinID:AGW42835.1 | ProteinID:AGW42836.1 | ProteinID:AGW42838.1 |
| ProteinID:AGW42844.1 | ProteinID:AGW42845.1 | ProteinID:AGW42850.1 | ProteinID:AGW42851.1 | ProteinID:AGW42852.1 | ProteinID:AGW42857.1 |
| ProteinID:AGW42864.1 | ProteinID:AGW42865.1 | ProteinID:AGW42866.1 | ProteinID:AGW42867.1 | ProteinID:AGW42868.1 | ProteinID:AGW42869.1 |
| ProteinID:AGW42870.1 | ProteinID:AGW42871.1 | ProteinID:AGW42874.1 | ProteinID:AGW42876.1 | ProteinID:AGW42877.1 | ProteinID:AGW42879.1 |
| ProteinID:AGW42881.1 | ProteinID:AGW42882.1 | ProteinID:AGW42883.1 | ProteinID:AGW42884.1 | ProteinID:AGW42888.1 | ProteinID:AGW42889.1 |
| ProteinID:AGW42891.1 | ProteinID:AGW42892.1 | ProteinID:AGW42893.1 | ProteinID:AGW42895.1 | ProteinID:AGW42896.1 | ProteinID:AGW42897.1 |
| ProteinID:AGW42898.1 | ProteinID:AGW42899.1 | ProteinID:AGW42900.1 | ProteinID:AGW42901.1 | ProteinID:AGW42902.1 | ProteinID:AGW42903.1 |
| ProteinID:AGW42906.1 | ProteinID:AGW42915.1 | ProteinID:AGW42916.1 | ProteinID:AGW42917.1 | ProteinID:AGW42920.1 | ProteinID:AGW42921.1 |
| ProteinID:AGW42923.1 | ProteinID:AGW42925.1 | ProteinID:AGW42926.1 | ProteinID:AGW42928.1 | ProteinID:AGW42929.1 | ProteinID:AGW42930.1 |
| ProteinID:AGW42933.1 | ProteinID:AGW42935.1 | ProteinID:AGW42936.1 | ProteinID:AGW42937.1 | ProteinID:AGW42938.1 | ProteinID:AGW42939.1 |
| ProteinID:AGW42941.1 | ProteinID:AGW42943.1 | ProteinID:AGW42944.1 | ProteinID:AGW42947.1 | ProteinID:AGW42948.1 | ProteinID:AGW42949.1 |
| ProteinID:AGW42951.1 | ProteinID:AGW42952.1 | ProteinID:AGW42953.1 | ProteinID:AGW42954.1 | ProteinID:AGW42958.1 | ProteinID:AGW42961.1 |
| ProteinID:AGW42962.1 | ProteinID:AGW42963.1 | ProteinID:AGW42964.1 | ProteinID:AGW42965.1 | ProteinID:AGW42966.1 | ProteinID:AGW42967.1 |
| ProteinID:AGW42968.1 | ProteinID:AGW42969.1 | ProteinID:AGW42971.1 | ProteinID:AGW42972.1 | ProteinID:AGW42974.1 | ProteinID:AGW42975.1 |
| ProteinID:AGW42976.1 | ProteinID:AGW42978.1 | ProteinID:AGW42981.1 | ProteinID:AJS15227.1 | ProteinID:AQK42315.1 | InterPro:CCT_domain |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009791 |
| GO:GO:0048579 | InterPro:IPR010402 | UniProt:K7TS29 | PFAM:PF06203 | PFscan:PS51017 | PANTHER:PTHR31319 |
| PANTHER:PTHR31319:SF9 | UniParc:UPI00022189BD | EnsemblPlantsGene:Zm00001d024909 | EnsemblPlants:Zm00001d024909_P001 | EnsemblPlants:Zm00001d024909_T001 | SEG:seg |
Description
CO CO-LIKE TIMING OF CAB1 protein domain1 CO CO-LIKE TIMING OF CAB1 protein domain1
Coordinates
chr10:-:94430850..94433495
Molecular Weight (calculated)
26213.4 Da
IEP (calculated)
6.263
GRAVY (calculated)
-0.692
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGPAACGV CGAAACCPHL LHTGDGNDDD LISRAFFSVF PVVGHHRRHE STSSPAMQQP SGCLHEFQFF GHQDDHHHQE TIAWLLDHPP PPAPELGGDD
101: GPSPAGDEND DQPAFHPFGT PQYHHPGKGN GNGLTFELDA TLGLGTARQT TETAEASATI MSFSGSTFTD AASKEPALID DGNELQMPVD QSSTEREVKL
201: MRYKEKRMRR CFEKQIRYAS RKAYAQVRPR VKGRFAKVTE
101: GPSPAGDEND DQPAFHPFGT PQYHHPGKGN GNGLTFELDA TLGLGTARQT TETAEASATI MSFSGSTFTD AASKEPALID DGNELQMPVD QSSTEREVKL
201: MRYKEKRMRR CFEKQIRYAS RKAYAQVRPR VKGRFAKVTE
001: MASKLCDSCK SATAALYCRP DAAFLCLSCD SKVHAANKLA SRHARVWMCE VCEQAPAHVT CKADAAALCV TCDRDIHSAN PLARRHERVP VTPFYDSVSS
101: DGSVKHTAVN FLDDCYFSDI DGNGSREEEE EEAASWLLLP NPKTTTTATA GIVAVTSAEE VPGDSPEMNT GQQYLFSDPD PYLDLDYGNV DPKVESLEQN
201: SSGTDGVVPV ENRTVRIPTV NENCFEMDFT GGSKGFTYGG GYNCISHSVS SSSMEVGVVP DGGSVADVSY PYGGPATSGA DPGTQRAVPL TSAEREARVM
301: RYREKRKNRK FEKTIRYASR KAYAEMRPRI KGRFAKRTDT NESNDVVGHG GIFSGFGLVP TF
101: DGSVKHTAVN FLDDCYFSDI DGNGSREEEE EEAASWLLLP NPKTTTTATA GIVAVTSAEE VPGDSPEMNT GQQYLFSDPD PYLDLDYGNV DPKVESLEQN
201: SSGTDGVVPV ENRTVRIPTV NENCFEMDFT GGSKGFTYGG GYNCISHSVS SSSMEVGVVP DGGSVADVSY PYGGPATSGA DPGTQRAVPL TSAEREARVM
301: RYREKRKNRK FEKTIRYASR KAYAEMRPRI KGRFAKRTDT NESNDVVGHG GIFSGFGLVP TF
Arabidopsis Description
COL4Zinc finger protein CONSTANS-LIKE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q940T9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.