Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- extracellular 4
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68559 | Canola | endoplasmic reticulum, plasma membrane | 82.58 | 82.05 |
| CDY36528 | Canola | endoplasmic reticulum, vacuole | 79.35 | 80.39 |
| Bra026165.1-P | Field mustard | extracellular | 68.39 | 77.94 |
| Solyc04g007500.1.1 | Tomato | endoplasmic reticulum, extracellular | 52.9 | 50.31 |
| PGSC0003DMT400015306 | Potato | endoplasmic reticulum, extracellular | 52.26 | 48.8 |
| KRG90922 | Soybean | endoplasmic reticulum, extracellular | 45.16 | 46.36 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 48.39 | 46.3 |
| KRH35862 | Soybean | endoplasmic reticulum, extracellular | 49.68 | 45.56 |
| PGSC0003DMT400078399 | Potato | cytosol | 49.68 | 45.56 |
| AT2G01150.2 | Thale cress | plastid | 57.42 | 45.41 |
| Solyc05g008640.1.1 | Tomato | cytosol | 47.74 | 43.27 |
Protein Annotations
| MapMan:11.1.2.4 | Gene3D:3.30.40.10 | EntrezGene:838073 | ProteinID:AAD39638.1 | ProteinID:AEE29264.1 | EMBL:AF078822 |
| ArrayExpress:AT1G15100 | EnsemblPlantsGene:AT1G15100 | RefSeq:AT1G15100 | TAIR:AT1G15100 | RefSeq:AT1G15100-TAIR-G | EnsemblPlants:AT1G15100.1 |
| TAIR:AT1G15100.1 | EMBL:AY075590 | EMBL:AY088303 | EMBL:AY094057 | EMBL:DQ059097 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009789 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0043161 | GO:GO:0046872 | GO:GO:0047484 |
| GO:GO:0061630 | InterPro:IPR001841 | InterPro:IPR013083 | RefSeq:NP_172962.1 | PFAM:PF13639 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0006504 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0009066 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020148 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50089 |
| PANTHER:PTHR14155 | PANTHER:PTHR14155:SF410 | UniProt:Q9ZT50 | Symbol:RHA2A | SMART:SM00184 | SUPFAM:SSF57850 |
| TMHMM:TMhelix | UniParc:UPI000009DD44 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
RHA2AE3 ubiquitin-protein ligase RHA2A [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT50]
Coordinates
chr1:-:5193284..5194214
Molecular Weight (calculated)
16983.7 Da
IEP (calculated)
7.684
GRAVY (calculated)
0.160
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLQGQLSDV SSDSIPLMLL SLLAVFINHL RSFLLRLTSK SNPNLPVDDV SIASGLANII VLADQLSLNR LFSYRCGDGG GGGSDCVVCL SKLKEGEEVR
101: KLECRHVFHK KCLEGWLHQF NFTCPLCRSA LVSDDCVSKT QRSVGRDLIS CFSLH
101: KLECRHVFHK KCLEGWLHQF NFTCPLCRSA LVSDDCVSKT QRSVGRDLIS CFSLH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.