Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G24640.1 | Thale cress | nucleus | 88.24 | 88.98 |
| CDY23829 | Canola | mitochondrion | 73.11 | 66.92 |
| Bra004644.1-P | Field mustard | nucleus, plastid | 65.55 | 60.94 |
| CDX79919 | Canola | nucleus, plastid | 65.55 | 60.94 |
| Bra004645.1-P | Field mustard | nucleus | 65.55 | 60.0 |
| CDX79918 | Canola | nucleus | 64.71 | 59.23 |
| CDY23828 | Canola | nucleus, plastid | 64.71 | 59.23 |
| CDY23827 | Canola | nucleus, plastid | 63.03 | 57.69 |
| GSMUA_Achr6P28310_001 | Banana | mitochondrion | 32.77 | 25.32 |
| AT5G40690.1 | Thale cress | plastid | 42.02 | 23.81 |
Protein Annotations
| MapMan:35.2 | EntrezGene:818772 | UniProt:A0A178VTC1 | ProteinID:AAC02775.1 | ProteinID:AEC10026.1 | EMBL:AK117561 |
| ArrayExpress:AT2G41730 | EnsemblPlantsGene:AT2G41730 | RefSeq:AT2G41730 | TAIR:AT2G41730 | RefSeq:AT2G41730-TAIR-G | EnsemblPlants:AT2G41730.1 |
| TAIR:AT2G41730.1 | EMBL:BT008525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009061 | GO:GO:0009987 |
| RefSeq:NP_181704.1 | UniProt:O22947 | ProteinID:OAP08425.1 | PO:PO:0000293 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009029 | PO:PO:0009031 | PANTHER:PTHR34278 | PANTHER:PTHR34278:SF1 | UniParc:UPI00000AC3EE | : |
Description
Calcium-binding site protein [Source:UniProtKB/TrEMBL;Acc:O22947]
Coordinates
chr2:+:17409370..17410334
Molecular Weight (calculated)
13265.3 Da
IEP (calculated)
9.763
GRAVY (calculated)
-1.159
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSEGRHQGI VRTGMIHPRG FNPRPTSNRL DSPPAFGDFT KVPSKTTNHS NTTGESERSK YSHCHVSPAI KSGHKSKGRR KLQPTSWWSE DKLDRLIGSD
101: SSSAKDILDT LCGEDHDEH
101: SSSAKDILDT LCGEDHDEH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.