Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033482.1-P | Field mustard | plastid | 52.0 | 61.32 |
| CDY23156 | Canola | plastid | 51.2 | 60.38 |
| CDY12774 | Canola | plastid | 50.4 | 59.43 |
| KRG92296 | Soybean | plastid | 40.0 | 53.76 |
| KRH34513 | Soybean | plastid | 38.4 | 51.61 |
| AT3G23170.1 | Thale cress | plastid | 42.4 | 49.53 |
| VIT_05s0049g00140.t01 | Wine grape | plastid | 40.8 | 49.04 |
| AT1G04330.1 | Thale cress | plastid | 35.2 | 44.0 |
| PGSC0003DMT400042096 | Potato | plastid | 37.6 | 40.87 |
| Solyc06g053700.1.1 | Tomato | nucleus | 36.8 | 40.0 |
| PGSC0003DMT400044456 | Potato | plastid | 35.2 | 38.26 |
| PGSC0003DMT400034981 | Potato | cytosol | 18.4 | 36.51 |
| Solyc09g089650.1.1 | Tomato | plastid | 33.6 | 36.21 |
| KRG90382 | Soybean | cytosol, mitochondrion, nucleus, plastid | 36.8 | 28.05 |
Protein Annotations
| MapMan:35.1 | EntrezGene:827090 | UniProt:A0A178V376 | ProteinID:AEE83446.1 | ArrayExpress:AT4G14450 | EnsemblPlantsGene:AT4G14450 |
| RefSeq:AT4G14450 | TAIR:AT4G14450 | RefSeq:AT4G14450-TAIR-G | EnsemblPlants:AT4G14450.1 | TAIR:AT4G14450.1 | EMBL:BT010915 |
| EMBL:BT011499 | ProteinID:CAB10224.1 | ProteinID:CAB78487.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0009507 | GO:GO:0009536 | RefSeq:NP_193181.3 | ProteinID:OAP00098.1 | PO:PO:0000293 | PANTHER:PTHR33912 |
| PANTHER:PTHR33912:SF2 | UniProt:Q6NN02 | UniParc:UPI0000225E65 | SEG:seg | : | : |
Description
Uncharacterized protein At4g14450, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q6NN02]
Coordinates
chr4:+:8309384..8310058
Molecular Weight (calculated)
14104.9 Da
IEP (calculated)
10.022
GRAVY (calculated)
-0.374
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MFFDTKVLNY PTIHKSISMA STMQRTSSSA ASNERQLSQL QRRAPSLMIK PTSFSNWNVA IPLLSPLAPS LTSSFDQSHV PPPQNKTEIP VEEEVKKTPV
101: FKKWQHPASP FCYEPTTFVP PFIQV
101: FKKWQHPASP FCYEPTTFVP PFIQV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.