CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033482.1-P	Field mustard	plastid	98.11	98.11
CDY12774	Canola	plastid	94.34	94.34
AT4G14450.1	Thale cress	plastid	60.38	51.2
CDX85063	Canola	plastid	47.17	47.62
CDX77544	Canola	plastid	46.23	45.79
KRG92296	Soybean	plastid	37.74	43.01
PGSC0003DMT400034981	Potato	cytosol	25.47	42.86
KRH34513	Soybean	plastid	36.79	41.94
VIT_05s0049g00140.t01	Wine grape	plastid	40.57	41.35
CDY32540	Canola	mitochondrion	35.85	40.43
PGSC0003DMT400042096	Potato	plastid	42.45	39.13
Solyc06g053700.1.1	Tomato	nucleus	41.51	38.26
CDY60670	Canola	nucleus, plastid	35.85	38.0
CDY18219	Canola	mitochondrion, plastid	35.85	38.0
PGSC0003DMT400044456	Potato	plastid	38.68	35.65
Solyc09g089650.1.1	Tomato	plastid	38.68	35.34
CDY52423	Canola	cytosol	31.13	30.28
KRG90382	Soybean	cytosol, mitochondrion, nucleus, plastid	39.62	25.61

Protein Annotations

EnsemblPlants:CDY23156	EnsemblPlantsGene:GSBRNA2T00021682001	PANTHER:PTHR33912	PANTHER:PTHR33912:SF2	ProteinID:CDY23156	ProteinID:CDY23156.1
SEG:seg	UniParc:UPI0004EECE06	UniProt:A0A078GCP8	MapMan:35.1	:	:

Description

BnaA04g06030DBnaA04g06030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCP8]

Coordinates

chrLK032141:+:12315..12635

Molecular Weight (calculated)

11766.9 Da

IEP (calculated)

9.817

GRAVY (calculated)

-0.405

Length

106 amino acids

Sequence
(BLAST)

001: MASTMAETSS SNVRDERPSN KLQRRLPSLK IEITSVTTWN VAIPLLSPLV SSPKSSFDQS AVAPSQNQAE KLADEVKKTP VFKKWQHPAS PFCYDQSTFV
101: QPFISV

Best Arabidopsis Sequence Match ( AT4G14450.1 )
(BLAST)

001: MFFDTKVLNY PTIHKSISMA STMQRTSSSA ASNERQLSQL QRRAPSLMIK PTSFSNWNVA IPLLSPLAPS LTSSFDQSHV PPPQNKTEIP VEEEVKKTPV
101: FKKWQHPASP FCYEPTTFVP PFIQV

Arabidopsis Description

Uncharacterized protein At4g14450, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q6NN02]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.