CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014915.1-P	Field mustard	plastid	99.07	99.07
CDX85063	Canola	plastid	86.92	88.57
AT3G23170.1	Thale cress	plastid	70.09	70.09
VIT_05s0049g00140.t01	Wine grape	plastid	49.53	50.96
KRG92296	Soybean	plastid	42.06	48.39
KRH34513	Soybean	plastid	42.06	48.39
CDY32540	Canola	mitochondrion	41.12	46.81
CDY23156	Canola	plastid	45.79	46.23
CDY12774	Canola	plastid	45.79	46.23
CDY18219	Canola	mitochondrion, plastid	42.06	45.0
CDY60670	Canola	nucleus, plastid	42.06	45.0
PGSC0003DMT400034981	Potato	cytosol	23.36	39.68
CDY52423	Canola	cytosol	40.19	39.45
PGSC0003DMT400044456	Potato	plastid	39.25	36.52
PGSC0003DMT400042096	Potato	plastid	38.32	35.65
Solyc06g053700.1.1	Tomato	nucleus	38.32	35.65
Solyc09g089650.1.1	Tomato	plastid	37.38	34.48
KRG90382	Soybean	cytosol, mitochondrion, nucleus, plastid	42.06	27.44

Protein Annotations

EnsemblPlants:CDX77544	EnsemblPlantsGene:GSBRNA2T00128441001	PANTHER:PTHR33912	PANTHER:PTHR33912:SF2	ProteinID:CDX77544	ProteinID:CDX77544.1
SEG:seg	UniParc:UPI0004EE5FD2	MapMan:35.2	:	:	:

Description

BnaA07g06820D

Coordinates

chrLK031811:+:1644167..1644490

Molecular Weight (calculated)

11453.8 Da

IEP (calculated)

10.329

GRAVY (calculated)

-0.232

Length

107 amino acids

Sequence
(BLAST)

001: MSTTMKTPVC SSGSGNQRQP SRLQKRPPAL KIVPAPANNW KTAIPLLSPL ALSPDSPVYQ PSVENPTKAA AVAPAVEKTP VFKTWQHPAA PFCYETSSTF
101: VPPFVPV

Best Arabidopsis Sequence Match ( AT3G23170.1 )
(BLAST)

001: MSTTMKRQGC SSDSGDLRRQ PSRLLKRPPA LKIVPATPAA NNWNTAIPLL SPLALSPESS PVDQPPVEKN QSTAVAVEKT PVFKKWQHPA APFYYESSTF
101: VPPFVPV

Arabidopsis Description

At3g23170 [Source:UniProtKB/TrEMBL;Acc:Q9LTD3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.