Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77544 | Canola | plastid | 88.57 | 86.92 |
| AT3G23170.1 | Thale cress | plastid | 72.38 | 71.03 |
| VIT_05s0049g00140.t01 | Wine grape | plastid | 48.57 | 49.04 |
| KRG92296 | Soybean | plastid | 42.86 | 48.39 |
| KRH34513 | Soybean | plastid | 42.86 | 48.39 |
| CDY23156 | Canola | plastid | 47.62 | 47.17 |
| CDY12774 | Canola | plastid | 47.62 | 47.17 |
| CDY32540 | Canola | mitochondrion | 41.9 | 46.81 |
| CDY18219 | Canola | mitochondrion, plastid | 42.86 | 45.0 |
| CDY60670 | Canola | nucleus, plastid | 42.86 | 45.0 |
| PGSC0003DMT400034981 | Potato | cytosol | 23.81 | 39.68 |
| CDY52423 | Canola | cytosol | 40.0 | 38.53 |
| PGSC0003DMT400042096 | Potato | plastid | 38.1 | 34.78 |
| PGSC0003DMT400044456 | Potato | plastid | 38.1 | 34.78 |
| Solyc06g053700.1.1 | Tomato | nucleus | 38.1 | 34.78 |
| Solyc09g089650.1.1 | Tomato | plastid | 37.14 | 33.62 |
| KRG90382 | Soybean | cytosol, mitochondrion, nucleus, plastid | 41.9 | 26.83 |
Protein Annotations
| EnsemblPlants:CDX85063 | EnsemblPlantsGene:GSBRNA2T00142513001 | PANTHER:PTHR33912 | PANTHER:PTHR33912:SF2 | ProteinID:CDX85063 | ProteinID:CDX85063.1 |
| SEG:seg | UniParc:UPI0004EE637A | MapMan:35.2 | : | : | : |
Description
BnaC07g08430D
Coordinates
chrLK031840:-:35561..36120
Molecular Weight (calculated)
11282.6 Da
IEP (calculated)
10.329
GRAVY (calculated)
-0.265
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTTMKTPGC SSGSGNQRQP SRLQKRPPAL KIVPAPANNW KTAIPLLSPL ALSPDSPVYQ PPVENQTKAA AVAVEKTPVF KTWQHPAAPF CYDLSSTFVP
101: PFVPV
101: PFVPV
001: MSTTMKRQGC SSDSGDLRRQ PSRLLKRPPA LKIVPATPAA NNWNTAIPLL SPLALSPESS PVDQPPVEKN QSTAVAVEKT PVFKKWQHPA APFYYESSTF
101: VPPFVPV
101: VPPFVPV
Arabidopsis Description
At3g23170 [Source:UniProtKB/TrEMBL;Acc:Q9LTD3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.