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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • plastid 6
  • extracellular 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:extracellular, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
EpiLoc:extracellular
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX77544 Canola plastid 99.07 99.07
Bra001905.1-P Field mustard plastid 69.16 71.84
AT3G23170.1 Thale cress plastid 69.16 69.16
VIT_05s0049g00140.t01 Wine grape plastid 49.53 50.96
KRG92296 Soybean plastid 42.06 48.39
KRH34513 Soybean plastid 42.06 48.39
Bra015304.1-P Field mustard nucleus, plastid 42.06 45.0
Bra033482.1-P Field mustard plastid 43.93 44.34
PGSC0003DMT400034981 Potato cytosol 23.36 39.68
PGSC0003DMT400044456 Potato plastid 39.25 36.52
PGSC0003DMT400042096 Potato plastid 38.32 35.65
Solyc06g053700.1.1 Tomato nucleus 38.32 35.65
Solyc09g089650.1.1 Tomato plastid 37.38 34.48
KRG90382 Soybean cytosol, mitochondrion, nucleus, plastid 42.06 27.44
Bra032517.1-P Field mustard nucleus, plastid 24.3 27.37
Protein Annotations
EnsemblPlants:Bra014915.1EnsemblPlants:Bra014915.1-PEnsemblPlantsGene:Bra014915PANTHER:PTHR33912PANTHER:PTHR33912:SF2SEG:seg
UniParc:UPI0002540ED2UniProt:M4DEJ4MapMan:35.2:::
Description
AT3G23170 (E=6e-027) | unknown protein
Coordinates
chrA07:+:5250144..5250467
Molecular Weight (calculated)
11481.9 Da
IEP (calculated)
10.329
GRAVY (calculated)
-0.209
Length
107 amino acids
Sequence
(BLAST)
001: MSTTMKTPVC SSGSGNQRQP SRLQKRPPAL KIVPAPANNW KTAIPLLSPL ALSPDSPVYQ PSVENPTKAA AVVPAVEKTP VFKTWQHPAA PFCYETSSTF
101: VPPFVPV
Best Arabidopsis Sequence Match ( AT3G23170.1 )
(BLAST)
001: MSTTMKRQGC SSDSGDLRRQ PSRLLKRPPA LKIVPATPAA NNWNTAIPLL SPLALSPESS PVDQPPVEKN QSTAVAVEKT PVFKKWQHPA APFYYESSTF
101: VPPFVPV
Arabidopsis Description
At3g23170 [Source:UniProtKB/TrEMBL;Acc:Q9LTD3]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.