Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- cytosol 1
- nucleus 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07426 | Canola | mitochondrion | 100.0 | 100.0 |
| Bra023625.1-P | Field mustard | mitochondrion | 57.37 | 73.4 |
| Bra023624.1-P | Field mustard | plastid | 65.0 | 68.42 |
| Bra023531.1-P | Field mustard | mitochondrion | 30.26 | 35.71 |
| Bra008682.1-P | Field mustard | golgi, nucleus, plasma membrane | 35.0 | 34.55 |
| AT1G31000.1 | Thale cress | cytosol | 32.63 | 33.97 |
| Bra023493.1-P | Field mustard | nucleus, plasma membrane, vacuole | 28.16 | 28.23 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:35.1 | EnsemblPlantsGene:Bra004091 | EnsemblPlants:Bra004091.1 | EnsemblPlants:Bra004091.1-P | InterPro:F-box-assoc_dom_typ3 |
| InterPro:F-box-assoc_interact_dom | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001810 | UniProt:M4CIQ7 | PFAM:PF00646 | PFAM:PF08268 | PFscan:PS50181 | PANTHER:PTHR31790 |
| PANTHER:PTHR31790:SF10 | SMART:SM00256 | SUPFAM:SSF81383 | TIGRFAMs:TIGR01640 | UniParc:UPI000254138B | SEG:seg |
Description
AT4G11590 (E=1e-044) | F-box family protein
Coordinates
chrA07:-:16778297..16779439
Molecular Weight (calculated)
43487.0 Da
IEP (calculated)
9.762
GRAVY (calculated)
-0.067
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MIRRSLRLCN KRRTYVVPLD LQIEILSRLP SKSVVRFMLV SKSWQEIISS KSFIRLRSLT QPLRFLLALH DRDNQTGRLS CSFFSSSSLS SSSPLISTTF
101: LSRITFPLRR ASYPSYYVNG LINVGEIICN PCTGKTISLP KLVKTTATSK PRLARRFFGY DPVNNQYKVL CITPDLAGHA TLEFNHYQIF TLGAKPKTWR
201: FIDCGIPHGI WCNGLCIDGF VYYIASTDVG MMCLMRFDLN SEKFNIYARV SEEMKALYFH HNGSRTLINY HGKVAIAIQP SHSVPSIDLF VFEAGKQDYK
301: EKSFYNLPQL HLRMKCVSNH MGDIIFAPSC SRSEFSVIHH DVKGAIFTKM KLEVDVKQDW FNDSSCFVDY VESPMLIKAR
101: LSRITFPLRR ASYPSYYVNG LINVGEIICN PCTGKTISLP KLVKTTATSK PRLARRFFGY DPVNNQYKVL CITPDLAGHA TLEFNHYQIF TLGAKPKTWR
201: FIDCGIPHGI WCNGLCIDGF VYYIASTDVG MMCLMRFDLN SEKFNIYARV SEEMKALYFH HNGSRTLINY HGKVAIAIQP SHSVPSIDLF VFEAGKQDYK
301: EKSFYNLPQL HLRMKCVSNH MGDIIFAPSC SRSEFSVIHH DVKGAIFTKM KLEVDVKQDW FNDSSCFVDY VESPMLIKAR
001: MRRRSKKIKT ENNSNPETSE ERNKFDEIPH DLVIEILERL PLKSVARFLT VSKLWATTIR SPDFRKSYRG GSSSEPRTLI VSDLNFKEPN PKLHFFRPSI
101: SSPSFLSSLT CPFTYPRHEE YYYHHVNGLI SVGYGTDQIV INPTTGKFIT LPRPKTRRKL VISFFGYDSV SDQYKVLCMT ERLRGHPEEA SSQHQVYTLG
201: AKQKSWKMIN CSIPHRPWSW NAVCINGVVY YIAKTGEGMF RRCLMRFDLK SDNLDLCTIL PEEIQTSLHD YFLINYKGKV AIPNQPNFYT YDVWVMNQEG
301: GKIEWLKNIT FTIKPRKGFV RYLFVTGTTH TGEFILAPTS YTDEFYVFHY NPDMNSFRKI RVQAPGVKFS FAQKASVVFS DHSLLRLDNL HIRGSTHTAT
401: GEFILAPRFY SDDLNVIHFN PDTNSFRSTK VEVYEDYE
101: SSPSFLSSLT CPFTYPRHEE YYYHHVNGLI SVGYGTDQIV INPTTGKFIT LPRPKTRRKL VISFFGYDSV SDQYKVLCMT ERLRGHPEEA SSQHQVYTLG
201: AKQKSWKMIN CSIPHRPWSW NAVCINGVVY YIAKTGEGMF RRCLMRFDLK SDNLDLCTIL PEEIQTSLHD YFLINYKGKV AIPNQPNFYT YDVWVMNQEG
301: GKIEWLKNIT FTIKPRKGFV RYLFVTGTTH TGEFILAPTS YTDEFYVFHY NPDMNSFRKI RVQAPGVKFS FAQKASVVFS DHSLLRLDNL HIRGSTHTAT
401: GEFILAPRFY SDDLNVIHFN PDTNSFRSTK VEVYEDYE
Arabidopsis Description
Putative F-box protein At5g15660 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFW0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.