Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 2
- plasma membrane 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G15670.1 | Thale cress | cytosol | 26.85 | 45.79 |
| AT4G11590.1 | Thale cress | cytosol | 40.82 | 37.53 |
| AT1G47810.1 | Thale cress | nucleus, peroxisome, plasma membrane | 33.7 | 35.04 |
| CDY42412 | Canola | mitochondrion | 32.33 | 34.91 |
| CDY28066 | Canola | cytosol | 26.85 | 34.88 |
| CDY66613 | Canola | mitochondrion | 33.15 | 34.57 |
| AT1G26515.1 | Thale cress | nucleus | 33.7 | 33.61 |
| CDX81594 | Canola | cytosol | 23.29 | 33.6 |
| AT1G19160.1 | Thale cress | cytosol | 31.78 | 33.14 |
| Bra023624.1-P | Field mustard | plastid | 32.6 | 32.96 |
| CDY66614 | Canola | cytosol, plastid | 32.88 | 32.88 |
| AT5G52610.1 | Thale cress | golgi, plasma membrane | 31.51 | 32.76 |
| Bra023625.1-P | Field mustard | mitochondrion | 26.58 | 32.66 |
| CDY07426 | Canola | mitochondrion | 33.97 | 32.63 |
| Bra004091.1-P | Field mustard | mitochondrion | 33.97 | 32.63 |
| CDX81596 | Canola | cytosol | 32.6 | 32.6 |
| AT1G26510.1 | Thale cress | nucleus | 35.34 | 32.49 |
| CDY02702 | Canola | plastid | 32.88 | 32.43 |
| CDY02701 | Canola | mitochondrion | 33.42 | 32.36 |
| AT5G15660.1 | Thale cress | cytosol | 38.36 | 31.96 |
| AT1G47800.1 | Thale cress | cytosol | 33.7 | 31.78 |
| CDX81593 | Canola | cytosol | 15.07 | 30.9 |
| CDY66612 | Canola | cytosol | 12.33 | 30.82 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:839986 | ProteinID:AAF98183.1 | ProteinID:AEE31305.2 | ArrayExpress:AT1G31000 |
| EnsemblPlantsGene:AT1G31000 | RefSeq:AT1G31000 | TAIR:AT1G31000 | RefSeq:AT1G31000-TAIR-G | EnsemblPlants:AT1G31000.1 | TAIR:AT1G31000.1 |
| Unigene:At.51847 | InterPro:F-box-assoc_dom_typ3 | InterPro:F-box-assoc_interact_dom | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:Gal_Oxase/kelch_b-propeller | InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| RefSeq:NP_174386.2 | PFAM:PF00646 | PFAM:PF08268 | PO:PO:0000084 | PANTHER:PTHR31790 | PANTHER:PTHR31790:SF10 |
| UniProt:Q9FYJ1 | SUPFAM:SSF50965 | SUPFAM:SSF81383 | TIGRFAMs:TIGR01640 | UniParc:UPI00000A9523 | SEG:seg |
Description
Putative F-box protein At1g31000 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYJ1]
Coordinates
chr1:-:11053377..11054567
Molecular Weight (calculated)
42524.6 Da
IEP (calculated)
8.522
GRAVY (calculated)
-0.154
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MRMTRRRTKK TEIRNDSDSV RIDIVIEIVK RLPLKDVSRF LLVSKLWSEI IRSPYFIRSF PFLFSSIQPH LLYALNSLDK DKGHHKCCDI HYVSGLICFG
101: YGQQQLITNP RTGKSIYLPK VKSRSKIIQS FFGYDPVYGQ YKVLCMSERM NDYLNVPSSE HQVFTLGGVQ KVEQSWRMIE CNIHHRPKTN SVCMDGVLYY
201: GAFTGGDMLE WCLMRFDVRT EKLDLVSRLN ESSIQCYRPG HSPSLIKYHG KVALAFETSL HTFELWVMED AEKWSKIRFS ICHSMHLFGQ DDDDAFLITG
301: NIHTGEIIFA PYDCDVRFGM THVVYYDLKT NRLRFRTVAF DLGTLFPQIS VMVPFFDYVE SAMLL
101: YGQQQLITNP RTGKSIYLPK VKSRSKIIQS FFGYDPVYGQ YKVLCMSERM NDYLNVPSSE HQVFTLGGVQ KVEQSWRMIE CNIHHRPKTN SVCMDGVLYY
201: GAFTGGDMLE WCLMRFDVRT EKLDLVSRLN ESSIQCYRPG HSPSLIKYHG KVALAFETSL HTFELWVMED AEKWSKIRFS ICHSMHLFGQ DDDDAFLITG
301: NIHTGEIIFA PYDCDVRFGM THVVYYDLKT NRLRFRTVAF DLGTLFPQIS VMVPFFDYVE SAMLL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.