Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- cytosol 1
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42412 | Canola | mitochondrion | 81.14 | 71.3 |
| Bra004091.1-P | Field mustard | mitochondrion | 73.4 | 57.37 |
| Bra023624.1-P | Field mustard | plastid | 60.94 | 50.14 |
| Bra023531.1-P | Field mustard | mitochondrion | 30.98 | 28.57 |
| AT1G31000.1 | Thale cress | cytosol | 32.66 | 26.58 |
| Bra008682.1-P | Field mustard | golgi, nucleus, plasma membrane | 32.32 | 24.94 |
| Bra023493.1-P | Field mustard | nucleus, plasma membrane, vacuole | 27.95 | 21.9 |
Protein Annotations
| EnsemblPlants:Bra023625.1 | EnsemblPlants:Bra023625.1-P | EnsemblPlantsGene:Bra023625 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:F-box-assoc_dom_typ3 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | PANTHER:PTHR31790 |
| PANTHER:PTHR31790:SF10 | PFAM:PF00646 | PFAM:PF08268 | PFscan:PS50181 | SEG:seg | SMART:SM00256 |
| SUPFAM:SSF81383 | UniParc:UPI000254312E | UniProt:M4E4C2 | MapMan:35.1 | : | : |
Description
AT4G11590 (E=3e-010) | F-box family protein
Coordinates
chrA02:+:4255091..4256364
Molecular Weight (calculated)
33894.8 Da
IEP (calculated)
9.778
GRAVY (calculated)
-0.226
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRSLRLCNK RKTNVVPLDL QIEILNRLPA KSIVRFMVVS NSWQEIIRSH TFIRSFPFRS LTQSQPLRFL LALHDKGDQT GRLSCSFFSS SSSSSLSSSS
101: TSISTTFLSK ITFPLRCRAS YRSYYVNGLM NMGEIICNPC TGKTISLPRD KRPAFSTRFF GYDPVNNQVS EEMKAFCYLE NGSRTLINYH GKVATAIQTS
201: YEPPTIDLFV FEAGKQDYKE KSFDNLPQLH LRVKSVINRA GDDIIFAPHH SRSVATVIHH DLKGASFKMM KFEVDVKGDW FTESNCFVDY VESLMLL
101: TSISTTFLSK ITFPLRCRAS YRSYYVNGLM NMGEIICNPC TGKTISLPRD KRPAFSTRFF GYDPVNNQVS EEMKAFCYLE NGSRTLINYH GKVATAIQTS
201: YEPPTIDLFV FEAGKQDYKE KSFDNLPQLH LRVKSVINRA GDDIIFAPHH SRSVATVIHH DLKGASFKMM KFEVDVKGDW FTESNCFVDY VESLMLL
001: MTTSQFKKSK LIENNSQSLE ILKEKNFNDV PLDVAIEIFM RLPVKSVARF LLLSKFWAEI IRSRHFITSF QVRSSLQPRL LVVFIDLNKQ WNCEDWYFFS
101: LSSSTTSYLS RVTCPFPDYV HYSHYVNGLI SHGYGLEKFI TNPSTGKSTV LGRVQTNSKV AQCFLGYDPV NDEYKLLVLC MKEKMQRHDG RTRILQLSSQ
201: HQVFPLGVKK KPWRMIDYTT PHGPVLNSVC IDGVLYYVAF TGEDLSQLSL MRFDLGSEKL DLFTSLPADF PAAFLHGFTL MRYKGKVALA TKTLFIGIEV
301: WVLDQQAEIH GWLKKSFSIK GVRRWLFCDL FITGTTHTGE FILAPRFYSN SFYVIYYNPD TKSLRKTKVE VHGGYDFKHR ETKAMVFPDY VETVRLL
101: LSSSTTSYLS RVTCPFPDYV HYSHYVNGLI SHGYGLEKFI TNPSTGKSTV LGRVQTNSKV AQCFLGYDPV NDEYKLLVLC MKEKMQRHDG RTRILQLSSQ
201: HQVFPLGVKK KPWRMIDYTT PHGPVLNSVC IDGVLYYVAF TGEDLSQLSL MRFDLGSEKL DLFTSLPADF PAAFLHGFTL MRYKGKVALA TKTLFIGIEV
301: WVLDQQAEIH GWLKKSFSIK GVRRWLFCDL FITGTTHTGE FILAPRFYSN SFYVIYYNPD TKSLRKTKVE VHGGYDFKHR ETKAMVFPDY VETVRLL
Arabidopsis Description
F-box protein At4g11590 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0C7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.