Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- plasma membrane 1
- nucleus 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69509 | Canola | golgi, nucleus, plasma membrane | 49.61 | 97.95 |
| AT5G15670.1 | Thale cress | cytosol | 30.13 | 54.21 |
| AT1G26515.1 | Thale cress | nucleus | 43.12 | 45.36 |
| Bra023531.1-P | Field mustard | mitochondrion | 37.14 | 44.41 |
| AT1G26510.1 | Thale cress | nucleus | 44.68 | 43.32 |
| AT5G15660.1 | Thale cress | cytosol | 46.23 | 40.64 |
| Bra023624.1-P | Field mustard | plastid | 32.99 | 35.18 |
| Bra004091.1-P | Field mustard | mitochondrion | 34.55 | 35.0 |
| Bra023493.1-P | Field mustard | nucleus, plasma membrane, vacuole | 34.03 | 34.56 |
| Bra023625.1-P | Field mustard | mitochondrion | 24.94 | 32.32 |
Protein Annotations
| EnsemblPlants:Bra008682.1 | EnsemblPlants:Bra008682.1-P | EnsemblPlantsGene:Bra008682 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-assoc_dom_typ3 | InterPro:F-box-assoc_interact_dom | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | PANTHER:PTHR31790 |
| PANTHER:PTHR31790:SF10 | PFAM:PF00646 | PFAM:PF08268 | PFscan:PS50181 | SEG:seg | SMART:SM00256 |
| SUPFAM:SSF81383 | TIGRFAMs:TIGR01640 | UniParc:UPI0002544DFB | UniProt:M4CWT5 | MapMan:35.1 | : |
Description
AT5G15660 (E=9e-091) | F-box family protein
Coordinates
chrA10:-:13370064..13371221
Molecular Weight (calculated)
44146.0 Da
IEP (calculated)
9.661
GRAVY (calculated)
-0.211
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MMITRSKKNK TTFTTNPQTS SSFDGLPLDL VIEILGRFPI KSIARFLLVS KLWATIIHSR DFIESFPLGS CSSQPRFLIA FSGLDIKKGT HYAKEDWYFF
101: SSSFLSRSSC SLPPVYRSHY VKGLLCIGSG REQFIVNPTS GKSIALPRVR TRRRTTKSFF GYDQVNDEYK VLCLTEALSG LHAEEPSSQH QVFTLGAKKK
201: SWRIVECSIP HRPCSSGVCI DGFIYYAAKT GSQRSLMRFD SRSEEFHLIT RVPSEIVLSK DQYSHAMIIN YQGKVAIPTK TSTYTFDVWV MDQNAEERKW
301: LKKLTFSVEP WKSACRFIYF KGITQTGEFI MAPYSYDSEN VYVALYNHYT DTLRKVKVQV SADFNFKPNL PGIFFSDYIE CVRFL
101: SSSFLSRSSC SLPPVYRSHY VKGLLCIGSG REQFIVNPTS GKSIALPRVR TRRRTTKSFF GYDQVNDEYK VLCLTEALSG LHAEEPSSQH QVFTLGAKKK
201: SWRIVECSIP HRPCSSGVCI DGFIYYAAKT GSQRSLMRFD SRSEEFHLIT RVPSEIVLSK DQYSHAMIIN YQGKVAIPTK TSTYTFDVWV MDQNAEERKW
301: LKKLTFSVEP WKSACRFIYF KGITQTGEFI MAPYSYDSEN VYVALYNHYT DTLRKVKVQV SADFNFKPNL PGIFFSDYIE CVRFL
001: MRRRSKKIKT ENNSNPETSE ERNKFDEIPH DLVIEILERL PLKSVARFLT VSKLWATTIR SPDFRKSYRG GSSSEPRTLI VSDLNFKEPN PKLHFFRPSI
101: SSPSFLSSLT CPFTYPRHEE YYYHHVNGLI SVGYGTDQIV INPTTGKFIT LPRPKTRRKL VISFFGYDSV SDQYKVLCMT ERLRGHPEEA SSQHQVYTLG
201: AKQKSWKMIN CSIPHRPWSW NAVCINGVVY YIAKTGEGMF RRCLMRFDLK SDNLDLCTIL PEEIQTSLHD YFLINYKGKV AIPNQPNFYT YDVWVMNQEG
301: GKIEWLKNIT FTIKPRKGFV RYLFVTGTTH TGEFILAPTS YTDEFYVFHY NPDMNSFRKI RVQAPGVKFS FAQKASVVFS DHSLLRLDNL HIRGSTHTAT
401: GEFILAPRFY SDDLNVIHFN PDTNSFRSTK VEVYEDYE
101: SSPSFLSSLT CPFTYPRHEE YYYHHVNGLI SVGYGTDQIV INPTTGKFIT LPRPKTRRKL VISFFGYDSV SDQYKVLCMT ERLRGHPEEA SSQHQVYTLG
201: AKQKSWKMIN CSIPHRPWSW NAVCINGVVY YIAKTGEGMF RRCLMRFDLK SDNLDLCTIL PEEIQTSLHD YFLINYKGKV AIPNQPNFYT YDVWVMNQEG
301: GKIEWLKNIT FTIKPRKGFV RYLFVTGTTH TGEFILAPTS YTDEFYVFHY NPDMNSFRKI RVQAPGVKFS FAQKASVVFS DHSLLRLDNL HIRGSTHTAT
401: GEFILAPRFY SDDLNVIHFN PDTNSFRSTK VEVYEDYE
Arabidopsis Description
Putative F-box protein At5g15660 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFW0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.