Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88218 | Canola | nucleus | 91.19 | 91.6 |
| CDY52626 | Canola | nucleus | 89.49 | 90.2 |
| AT5G26160.2 | Thale cress | nucleus | 63.84 | 57.89 |
| PGSC0003DMT400021201 | Potato | cytosol | 38.53 | 30.8 |
| Solyc08g062500.2.1 | Tomato | mitochondrion | 36.05 | 30.53 |
| KRH15624 | Soybean | nucleus | 37.29 | 30.22 |
| KRH05392 | Soybean | mitochondrion | 36.16 | 29.33 |
| VIT_04s0008g01460.t01 | Wine grape | nucleus | 39.21 | 28.82 |
| Bra020112.1-P | Field mustard | nucleus | 34.24 | 28.37 |
| Bra002315.1-P | Field mustard | nucleus | 34.24 | 25.59 |
| Bra034929.1-P | Field mustard | cytosol | 19.89 | 21.18 |
| Bra034930.1-P | Field mustard | cytosol | 13.67 | 20.03 |
Protein Annotations
Description
AT5G26160 (E=5e-118) | unknown protein
Coordinates
chrA06:+:17885026..17887776
Molecular Weight (calculated)
97414.4 Da
IEP (calculated)
4.491
GRAVY (calculated)
-0.388
Length
885 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSNDREDSY NGQLLRDIKE VSKALYLHNA PQRPLLSLPP PVRSRSVSKG TTESGVLLLS KKKKSSVSWD WKKPLKAIAH LGQRRFDVCF HLHVHSIEGL
101: PSNLDGTKLV VRWKRKEEVM STQPYNVLQG TATFEETLMH RCSVYGSKHG PHRSAKYDQK LFLVCVSPVD APWLVLGKHW VDLARILPLS LEELEGARSS
201: RKWNTSFKLS GVADSAALNL SFDYSVVTSS VCDSASGGNL MLKRVGSVPS MERRSSPVDD GKVSHQLSPN LSLDLSRSVD LLYEKLDEQN QETSTGAKVE
301: QGVETDKQED DYKNTGKEVE ERTDSKEIEI IDVYELLKDE DEGAEETCFV DQLSVAELKG SDSIESKSSS AVDDCTEEEN FVEVKSANVL TKSRSLDDIT
401: ESVANDFLNM LELEESSYVY TSDGEPTSPR ESLLREFEKE ALASGNGLLE YVSDIDEEPN DFSFSSSSVG EGKSQLLMSR RNVKLLEDLE TETLLREWDL
501: DDNGFDDSLC ICSDGFGSPI ELPVDERPLG YNIGPLFWTK GGGCVRSMSP LLFRNCKDAS RLIMQVSVPV VLVPELGSGV LEILQSLAAS GIEGLCSEIN
601: ALMPLEDIMG KTINEVIEDT SFERNAHDSS KENLGGFGSN MCSGYVPLDA LASLAIDGIE SLSVEGLKIQ CSMSDQDPPS ATAPKPMDQS EALELISFSL
701: TLDEWLRLDH RTSDTEDTSR NKLTLALRVL LRDPSRYNEP VGASMLALIQ VERSLASSNP PVCNLAQEES FGNGTHLWRI TDIGLAGLKT EPGVDLPWCT
801: KTQQESGSRW LLASGTGKTI NCQASKSKAI IVSNPQATRK NLDTLWSITI DSRHNQEGDL SSSASFVPLT RNSDVIFSDE ITKGL
101: PSNLDGTKLV VRWKRKEEVM STQPYNVLQG TATFEETLMH RCSVYGSKHG PHRSAKYDQK LFLVCVSPVD APWLVLGKHW VDLARILPLS LEELEGARSS
201: RKWNTSFKLS GVADSAALNL SFDYSVVTSS VCDSASGGNL MLKRVGSVPS MERRSSPVDD GKVSHQLSPN LSLDLSRSVD LLYEKLDEQN QETSTGAKVE
301: QGVETDKQED DYKNTGKEVE ERTDSKEIEI IDVYELLKDE DEGAEETCFV DQLSVAELKG SDSIESKSSS AVDDCTEEEN FVEVKSANVL TKSRSLDDIT
401: ESVANDFLNM LELEESSYVY TSDGEPTSPR ESLLREFEKE ALASGNGLLE YVSDIDEEPN DFSFSSSSVG EGKSQLLMSR RNVKLLEDLE TETLLREWDL
501: DDNGFDDSLC ICSDGFGSPI ELPVDERPLG YNIGPLFWTK GGGCVRSMSP LLFRNCKDAS RLIMQVSVPV VLVPELGSGV LEILQSLAAS GIEGLCSEIN
601: ALMPLEDIMG KTINEVIEDT SFERNAHDSS KENLGGFGSN MCSGYVPLDA LASLAIDGIE SLSVEGLKIQ CSMSDQDPPS ATAPKPMDQS EALELISFSL
701: TLDEWLRLDH RTSDTEDTSR NKLTLALRVL LRDPSRYNEP VGASMLALIQ VERSLASSNP PVCNLAQEES FGNGTHLWRI TDIGLAGLKT EPGVDLPWCT
801: KTQQESGSRW LLASGTGKTI NCQASKSKAI IVSNPQATRK NLDTLWSITI DSRHNQEGDL SSSASFVPLT RNSDVIFSDE ITKGL
001: MSVNDREDSS ADLYNGQLLR DIKEVSKALY LTNGPQRPVL SLSPPVRSQS VSRTTEIGLV LSNKKKKSLV PWNWKKPLNA IAHFGQRRFD VCFLLHVHSI
101: EGLPLNLDGT KLVVQWKRKD EVMTTQPSKV LQGTAEFEET LTHRCSVYGS KHGPHRSAKY QVKLFLIYVS PVDAPWLVLG KHWIDLTRIL PLSLEEMEGT
201: RSTRKWNTSF KLSGLAESAV LNLSFDYSVV TSSVCDSTSK NVMLRRVGSV PSMDHRSPPL DDGKVVNEVS PSLSLNLSQS IDFLYEKLGE QNPQRSTGTE
301: VELGLETDKQ AADSDDSGKG VETFQQERSG LEESNDPNTE SSRIEIIDVH EILKDEDESV FEETYFIDQL SVAALKSEPS NLLPKHSVDG TPKSTFSSQV
401: ISESSESKSP SAMDDSTEKE NFLEVKSSYK AAKISMTSLS LDDITESVAN DFLNMLELEE CSYVYTSDGE PTSPRESLLR EFEKEAFASG NFLLDLNGEA
501: EYVSDIDEKS NDFSFSASSL DVGENKREGK SQLLIDRRKA KVLEDLETET LLRECDFDDN SFDNSLCVCS DGFGSPIELP VDKGLDLLPL GDNIGPSVWT
601: KGGGCIRSMN HLLFRESKEA SQLIMQVSVP VVLVSELGSD ILEILQIFAA SGIEGLCSEV NALIPLEDIM GKTIHEVVDV TKFKRTGQDC SDKSKGVVVQ
701: KPPGQLHLCS SNEEFGSSMC PSNVPLEDVT SLAIDEIYIL SIEGLKIQCS MSDQDPPSGI APKPMDQSDA LELIRFSLTL DEWLRLDQGM LENKDQDLAS
801: NGKGHTLRNK LTLALQVLLR DPSLNNEPIG ASMLALIQVE RSLDSPNSSL CSLAQEGRNK ESFGYDTQLW RITEIGLAGL KIEPGADHPW CTKSQQQSGS
901: RWLLANGTDK TIKCQASESK VIIVSNVQAT RKRLDTLWSI ISDRHHQEGD LSNSAASVPF TRNLDVIFSN EVTERS
101: EGLPLNLDGT KLVVQWKRKD EVMTTQPSKV LQGTAEFEET LTHRCSVYGS KHGPHRSAKY QVKLFLIYVS PVDAPWLVLG KHWIDLTRIL PLSLEEMEGT
201: RSTRKWNTSF KLSGLAESAV LNLSFDYSVV TSSVCDSTSK NVMLRRVGSV PSMDHRSPPL DDGKVVNEVS PSLSLNLSQS IDFLYEKLGE QNPQRSTGTE
301: VELGLETDKQ AADSDDSGKG VETFQQERSG LEESNDPNTE SSRIEIIDVH EILKDEDESV FEETYFIDQL SVAALKSEPS NLLPKHSVDG TPKSTFSSQV
401: ISESSESKSP SAMDDSTEKE NFLEVKSSYK AAKISMTSLS LDDITESVAN DFLNMLELEE CSYVYTSDGE PTSPRESLLR EFEKEAFASG NFLLDLNGEA
501: EYVSDIDEKS NDFSFSASSL DVGENKREGK SQLLIDRRKA KVLEDLETET LLRECDFDDN SFDNSLCVCS DGFGSPIELP VDKGLDLLPL GDNIGPSVWT
601: KGGGCIRSMN HLLFRESKEA SQLIMQVSVP VVLVSELGSD ILEILQIFAA SGIEGLCSEV NALIPLEDIM GKTIHEVVDV TKFKRTGQDC SDKSKGVVVQ
701: KPPGQLHLCS SNEEFGSSMC PSNVPLEDVT SLAIDEIYIL SIEGLKIQCS MSDQDPPSGI APKPMDQSDA LELIRFSLTL DEWLRLDQGM LENKDQDLAS
801: NGKGHTLRNK LTLALQVLLR DPSLNNEPIG ASMLALIQVE RSLDSPNSSL CSLAQEGRNK ESFGYDTQLW RITEIGLAGL KIEPGADHPW CTKSQQQSGS
901: RWLLANGTDK TIKCQASESK VIIVSNVQAT RKRLDTLWSI ISDRHHQEGD LSNSAASVPF TRNLDVIFSN EVTERS
Arabidopsis Description
PMIR2Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y219]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.