Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88218 | Canola | nucleus | 89.86 | 89.56 |
| Bra009884.1-P | Field mustard | nucleus | 90.2 | 89.49 |
| AT5G26160.2 | Thale cress | nucleus | 63.33 | 56.97 |
| CDX92449 | Canola | nucleus | 34.51 | 30.92 |
| KRH15624 | Soybean | nucleus | 37.47 | 30.13 |
| PGSC0003DMT400021201 | Potato | cytosol | 37.7 | 29.9 |
| Solyc08g062500.2.1 | Tomato | mitochondrion | 35.42 | 29.76 |
| CDY16548 | Canola | nucleus | 34.85 | 29.68 |
| KRH05392 | Soybean | mitochondrion | 36.67 | 29.51 |
| VIT_04s0008g01460.t01 | Wine grape | nucleus | 39.75 | 28.99 |
| CDY45081 | Canola | nucleus | 34.97 | 28.93 |
| CDY35798 | Canola | cytosol | 19.93 | 21.63 |
| CDX80727 | Canola | cytosol | 19.82 | 21.59 |
Protein Annotations
| EnsemblPlants:CDY52626 | EnsemblPlantsGene:GSBRNA2T00007412001 | InterPro:IPR019448 | InterPro:NT-C2 | PANTHER:PTHR33414 | PANTHER:PTHR33414:SF9 |
| PFAM:PF10358 | PFscan:PS51840 | ProteinID:CDY52626 | ProteinID:CDY52626.1 | SEG:seg | UniParc:UPI0004EE127F |
| UniProt:A0A078IRZ2 | MapMan:20.5.6 | : | : | : | : |
Description
BnaC07g49520DBnaC07g49520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRZ2]
Coordinates
chrLK033109:+:28811..31540
Molecular Weight (calculated)
96712.5 Da
IEP (calculated)
4.545
GRAVY (calculated)
-0.363
Length
878 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSNNREDSY NGQLLRDIKE VSKALYLHNA PQRPLLSLPP PVRSRSVSKG TTESGVLLPS KKKKSSVSWD WKKPLKAIAH LGQRRFDVCF HLHVHSIEGL
101: PSNLDGTKLV VRWKRKEEVM STQPYNVLQG TATFEETLTH RCSVYGTKHG PHRSAKYDQK LFLVCASPVD SPWLVLGKHW VDLARILPLS LEEMEGVRSS
201: RKWNTSFKLS GVADSAVLNL SFDYSVVTSS VCDSASGGNV MLKRVGSVPS MERRSSPVDD GKVSHQLSPN LSLDLSRSVD LLYEKLDERN QERSTGTKVE
301: QGVETDRQED DSKNTGKEVG ERTDSKEIEI IDVYELLKDE DEDAEETCFV DQLPVAELKS SDSFEIKSSS AIDDSTEDLE VKSSYKAAQV LTKSRSLDDI
401: TESVANDFLN LLELEESSYV YTADGEPTSP REYLLREFEK EALASGNCLL EYVSDIDEEP NDFSFSSSSV SEGNSQLLMS RRNAKLLEDL ETETLMREWD
501: LDDNGFNDSL CVCSDGFGSP IELPVDERPL GYNIGPLFWT KGGGCVRSMS PLLFRKCKDA SRLIMQVSVP VVLVPELGSG VLEILQSLAA SGIEGLCSEI
601: NALMPLEDIV GKTIHEVIED TTLERNAHDC SSKENFGGFG SGYVPLDALA SLAIDGIESL SVEGLKIQCS MSDQDPPSVT AAKLIDQSEA LELISFSLTL
701: DEWLRLDHRT SDTEDTSGNK LTLALRVLLR DPSRYNEPVG ASMLALIQVE RSLVSSNPPL CSLVQGESFG NDTHLWRITD IGLAGLKTEP GVDHPWCTET
801: QQESGSCWLL ASGTGETINC QASKSKAIIV SNPHATRKNL DTLWSITIDS RHNQEGDLSS SASFVPLARN SDVIFSGL
101: PSNLDGTKLV VRWKRKEEVM STQPYNVLQG TATFEETLTH RCSVYGTKHG PHRSAKYDQK LFLVCASPVD SPWLVLGKHW VDLARILPLS LEEMEGVRSS
201: RKWNTSFKLS GVADSAVLNL SFDYSVVTSS VCDSASGGNV MLKRVGSVPS MERRSSPVDD GKVSHQLSPN LSLDLSRSVD LLYEKLDERN QERSTGTKVE
301: QGVETDRQED DSKNTGKEVG ERTDSKEIEI IDVYELLKDE DEDAEETCFV DQLPVAELKS SDSFEIKSSS AIDDSTEDLE VKSSYKAAQV LTKSRSLDDI
401: TESVANDFLN LLELEESSYV YTADGEPTSP REYLLREFEK EALASGNCLL EYVSDIDEEP NDFSFSSSSV SEGNSQLLMS RRNAKLLEDL ETETLMREWD
501: LDDNGFNDSL CVCSDGFGSP IELPVDERPL GYNIGPLFWT KGGGCVRSMS PLLFRKCKDA SRLIMQVSVP VVLVPELGSG VLEILQSLAA SGIEGLCSEI
601: NALMPLEDIV GKTIHEVIED TTLERNAHDC SSKENFGGFG SGYVPLDALA SLAIDGIESL SVEGLKIQCS MSDQDPPSVT AAKLIDQSEA LELISFSLTL
701: DEWLRLDHRT SDTEDTSGNK LTLALRVLLR DPSRYNEPVG ASMLALIQVE RSLVSSNPPL CSLVQGESFG NDTHLWRITD IGLAGLKTEP GVDHPWCTET
801: QQESGSCWLL ASGTGETINC QASKSKAIIV SNPHATRKNL DTLWSITIDS RHNQEGDLSS SASFVPLARN SDVIFSGL
001: MSVNDREDSS ADLYNGQLLR DIKEVSKALY LTNGPQRPVL SLSPPVRSQS VSRTTEIGLV LSNKKKKSLV PWNWKKPLNA IAHFGQRRFD VCFLLHVHSI
101: EGLPLNLDGT KLVVQWKRKD EVMTTQPSKV LQGTAEFEET LTHRCSVYGS KHGPHRSAKY QVKLFLIYVS PVDAPWLVLG KHWIDLTRIL PLSLEEMEGT
201: RSTRKWNTSF KLSGLAESAV LNLSFDYSVV TSSVCDSTSK NVMLRRVGSV PSMDHRSPPL DDGKVVNEVS PSLSLNLSQS IDFLYEKLGE QNPQRSTGTE
301: VELGLETDKQ AADSDDSGKG VETFQQERSG LEESNDPNTE SSRIEIIDVH EILKDEDESV FEETYFIDQL SVAALKSEPS NLLPKHSVDG TPKSTFSSQV
401: ISESSESKSP SAMDDSTEKE NFLEVKSSYK AAKISMTSLS LDDITESVAN DFLNMLELEE CSYVYTSDGE PTSPRESLLR EFEKEAFASG NFLLDLNGEA
501: EYVSDIDEKS NDFSFSASSL DVGENKREGK SQLLIDRRKA KVLEDLETET LLRECDFDDN SFDNSLCVCS DGFGSPIELP VDKGLDLLPL GDNIGPSVWT
601: KGGGCIRSMN HLLFRESKEA SQLIMQVSVP VVLVSELGSD ILEILQIFAA SGIEGLCSEV NALIPLEDIM GKTIHEVVDV TKFKRTGQDC SDKSKGVVVQ
701: KPPGQLHLCS SNEEFGSSMC PSNVPLEDVT SLAIDEIYIL SIEGLKIQCS MSDQDPPSGI APKPMDQSDA LELIRFSLTL DEWLRLDQGM LENKDQDLAS
801: NGKGHTLRNK LTLALQVLLR DPSLNNEPIG ASMLALIQVE RSLDSPNSSL CSLAQEGRNK ESFGYDTQLW RITEIGLAGL KIEPGADHPW CTKSQQQSGS
901: RWLLANGTDK TIKCQASESK VIIVSNVQAT RKRLDTLWSI ISDRHHQEGD LSNSAASVPF TRNLDVIFSN EVTERS
101: EGLPLNLDGT KLVVQWKRKD EVMTTQPSKV LQGTAEFEET LTHRCSVYGS KHGPHRSAKY QVKLFLIYVS PVDAPWLVLG KHWIDLTRIL PLSLEEMEGT
201: RSTRKWNTSF KLSGLAESAV LNLSFDYSVV TSSVCDSTSK NVMLRRVGSV PSMDHRSPPL DDGKVVNEVS PSLSLNLSQS IDFLYEKLGE QNPQRSTGTE
301: VELGLETDKQ AADSDDSGKG VETFQQERSG LEESNDPNTE SSRIEIIDVH EILKDEDESV FEETYFIDQL SVAALKSEPS NLLPKHSVDG TPKSTFSSQV
401: ISESSESKSP SAMDDSTEKE NFLEVKSSYK AAKISMTSLS LDDITESVAN DFLNMLELEE CSYVYTSDGE PTSPRESLLR EFEKEAFASG NFLLDLNGEA
501: EYVSDIDEKS NDFSFSASSL DVGENKREGK SQLLIDRRKA KVLEDLETET LLRECDFDDN SFDNSLCVCS DGFGSPIELP VDKGLDLLPL GDNIGPSVWT
601: KGGGCIRSMN HLLFRESKEA SQLIMQVSVP VVLVSELGSD ILEILQIFAA SGIEGLCSEV NALIPLEDIM GKTIHEVVDV TKFKRTGQDC SDKSKGVVVQ
701: KPPGQLHLCS SNEEFGSSMC PSNVPLEDVT SLAIDEIYIL SIEGLKIQCS MSDQDPPSGI APKPMDQSDA LELIRFSLTL DEWLRLDQGM LENKDQDLAS
801: NGKGHTLRNK LTLALQVLLR DPSLNNEPIG ASMLALIQVE RSLDSPNSSL CSLAQEGRNK ESFGYDTQLW RITEIGLAGL KIEPGADHPW CTKSQQQSGS
901: RWLLANGTDK TIKCQASESK VIIVSNVQAT RKRLDTLWSI ISDRHHQEGD LSNSAASVPF TRNLDVIFSN EVTERS
Arabidopsis Description
PMIR2Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y219]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.