Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16548 | Canola | nucleus | 84.8 | 80.6 |
| Bra002315.1-P | Field mustard | nucleus | 83.27 | 68.92 |
| CDY45081 | Canola | nucleus | 70.0 | 64.66 |
| AT5G20610.1 | Thale cress | nucleus | 68.98 | 58.08 |
| VIT_11s0016g01610.t01 | Wine grape | cytosol | 12.04 | 46.83 |
| VIT_11s0016g01690.t01 | Wine grape | cytosol | 50.92 | 42.43 |
| Os01t0714100-01 | Rice | cytosol | 16.33 | 40.51 |
| Solyc05g032750.2.1 | Tomato | nucleus | 45.51 | 40.4 |
| PGSC0003DMT400028119 | Potato | cytosol | 46.94 | 40.17 |
| PGSC0003DMT400053992 | Potato | nucleus | 46.33 | 40.0 |
| Solyc07g041180.2.1 | Tomato | nucleus | 45.92 | 39.82 |
| KRH19252 | Soybean | nucleus | 31.43 | 39.39 |
| KRH12468 | Soybean | cytosol | 44.8 | 39.27 |
| KRH37453 | Soybean | cytosol | 48.57 | 38.92 |
| GSMUA_Achr1P05230_001 | Banana | nucleus | 42.04 | 37.63 |
| Zm00001d042647_P001 | Maize | mitochondrion | 6.73 | 35.11 |
| CDY52626 | Canola | nucleus | 30.92 | 34.51 |
| CDX88218 | Canola | nucleus | 30.82 | 34.28 |
| HORVU3Hr1G067440.1 | Barley | plastid | 33.98 | 33.47 |
| TraesCS3D01G248600.1 | Wheat | nucleus | 38.27 | 33.04 |
| Zm00001d011716_P001 | Maize | nucleus | 38.27 | 32.67 |
| OQU87417 | Sorghum | nucleus | 38.37 | 32.47 |
| Zm00001d043666_P001 | Maize | nucleus | 37.86 | 32.4 |
| KRH02657 | Soybean | nucleus | 5.92 | 31.87 |
| TraesCS3B01G277400.1 | Wheat | cytosol | 37.86 | 30.64 |
| Zm00001d044668_P001 | Maize | extracellular | 23.47 | 30.38 |
| Zm00001d020517_P001 | Maize | mitochondrion | 13.47 | 27.27 |
| Zm00001d037913_P001 | Maize | plastid | 5.92 | 26.24 |
| CDY35798 | Canola | cytosol | 18.27 | 22.13 |
| CDX80727 | Canola | cytosol | 18.16 | 22.08 |
Protein Annotations
| EnsemblPlants:CDX92449 | EnsemblPlantsGene:GSBRNA2T00154217001 | InterPro:IPR019448 | InterPro:NT-C2 | ncoils:Coil | PANTHER:PTHR33414 |
| PANTHER:PTHR33414:SF1 | PFAM:PF10358 | PFscan:PS51840 | ProteinID:CDX92449 | ProteinID:CDX92449.1 | SEG:seg |
| UniParc:UPI0004EDE9AF | MapMan:20.5.6 | : | : | : | : |
Description
BnaA10g14880D
Coordinates
chrLK031872:-:714041..718469
Molecular Weight (calculated)
107726.0 Da
IEP (calculated)
4.451
GRAVY (calculated)
-0.606
Length
980 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKANSEEPS SSRKLLKEVE TLNESLYVNK NPRRSVVAPS NTSTKPSAGE PQKEKKSIWN WPLRALSHVR NRRFNCCFSA QIHSIDNLPP TFQDLYLTVH
101: WKRRDESLTT RPAKVMNGRA EFKDKMTHTC SVYGSRSGQH HSAKYEAKHF LLYAALVGSP DVDLGKHRMD LTSLLPLTLE ELQDEKSSGK WSTTFQLTGK
201: ASGATLSVSF GYTVVGDTRS ASNAKQGSSN AALTRAVSGN KESRPLSKNV VEVKDLHEVL PVAAQSDLVS SVNALYKKFD EEKVDAAAAE SQFESDVVIK
301: HIEPDESNED ANAHQVEEQV PSTFEKDIKQ AVEDTTAGIE EAGTENLPLE EPLVSRKETD VSFEEPKIAG EVPITRSEEA VEISRENLPS EERSNSNVSP
401: KEEESIVYAD DEDVMNGGRD VKETIMKDLE SALESVEMLE ATASEDEEDH GGSSTPNKEA ASTTSIDVAD SVANEFLDML GIEHSPLGLT SESEPESPRE
501: RLLREFEMET LADSSLFGFS IESDADPQTE VDENYESDFD LASLVHDIEE EYQIETQARV SNPRAKMLED LETESLMREW GMNENTFQNS PPHNAFPPAD
601: FPVNEMFDLP PLGDGLGPVV QTKNGGFVRS MNPLLFRNSK AGGSLIMQVS SPVVVPAEMG SGIMEILQRL ANAGIEKLSM QANKVMPLDD ITGKTMEEVS
701: PGIDSGHRDH VPPQHDTAAK PKKFGSSSGH NNLGSEYVSL EDLAPLAMDQ IEALSLEGLR IQSGMSEEDA PSDITAQSIG EISAFQDGDD ADGLMGLSLT
801: LDEWMKLDSG DIGDEEEINE QTKCGLLGNN FTVALMVQLR DPLRNYEPVG APMLSLIQVE RLFVPPKPII YSTVSELRKT DEEGEETEYK ISEVHLTGMK
901: SETDKKPWGV TTQNQQVQSG SRWLMANGMG KGNNTKVPLM KPKPGDKLWS VSGSGSKWKE LGKMGKLSAH KRNPNVIMPK
101: WKRRDESLTT RPAKVMNGRA EFKDKMTHTC SVYGSRSGQH HSAKYEAKHF LLYAALVGSP DVDLGKHRMD LTSLLPLTLE ELQDEKSSGK WSTTFQLTGK
201: ASGATLSVSF GYTVVGDTRS ASNAKQGSSN AALTRAVSGN KESRPLSKNV VEVKDLHEVL PVAAQSDLVS SVNALYKKFD EEKVDAAAAE SQFESDVVIK
301: HIEPDESNED ANAHQVEEQV PSTFEKDIKQ AVEDTTAGIE EAGTENLPLE EPLVSRKETD VSFEEPKIAG EVPITRSEEA VEISRENLPS EERSNSNVSP
401: KEEESIVYAD DEDVMNGGRD VKETIMKDLE SALESVEMLE ATASEDEEDH GGSSTPNKEA ASTTSIDVAD SVANEFLDML GIEHSPLGLT SESEPESPRE
501: RLLREFEMET LADSSLFGFS IESDADPQTE VDENYESDFD LASLVHDIEE EYQIETQARV SNPRAKMLED LETESLMREW GMNENTFQNS PPHNAFPPAD
601: FPVNEMFDLP PLGDGLGPVV QTKNGGFVRS MNPLLFRNSK AGGSLIMQVS SPVVVPAEMG SGIMEILQRL ANAGIEKLSM QANKVMPLDD ITGKTMEEVS
701: PGIDSGHRDH VPPQHDTAAK PKKFGSSSGH NNLGSEYVSL EDLAPLAMDQ IEALSLEGLR IQSGMSEEDA PSDITAQSIG EISAFQDGDD ADGLMGLSLT
801: LDEWMKLDSG DIGDEEEINE QTKCGLLGNN FTVALMVQLR DPLRNYEPVG APMLSLIQVE RLFVPPKPII YSTVSELRKT DEEGEETEYK ISEVHLTGMK
901: SETDKKPWGV TTQNQQVQSG SRWLMANGMG KGNNTKVPLM KPKPGDKLWS VSGSGSKWKE LGKMGKLSAH KRNPNVIMPK
0001: MSKVNSEESS SSQKLLKEVE KISEALYVNK NPRGSVAGSN KTPTKPLSRS NLAEPKEKKS FWNWPLRAIN HVRNRRFNCC FSAQVHSIEG LPPIFQDLSL
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
Arabidopsis Description
PMIR1Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:F4K5K6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.