Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g041180.2.1 | Tomato | nucleus | 92.33 | 92.74 |
| PGSC0003DMT400028119 | Potato | cytosol | 62.91 | 62.36 |
| VIT_11s0016g01610.t01 | Wine grape | cytosol | 13.39 | 60.32 |
| Os01t0714100-01 | Rice | cytosol | 18.68 | 53.67 |
| VIT_11s0016g01690.t01 | Wine grape | cytosol | 55.59 | 53.66 |
| KRH12468 | Soybean | cytosol | 47.75 | 48.48 |
| CDY16548 | Canola | nucleus | 42.11 | 46.36 |
| CDX92449 | Canola | nucleus | 40.0 | 46.33 |
| GSMUA_Achr1P05230_001 | Banana | nucleus | 44.49 | 46.12 |
| KRH37453 | Soybean | cytosol | 49.34 | 45.79 |
| CDY45081 | Canola | nucleus | 42.64 | 45.62 |
| KRH02657 | Soybean | nucleus | 7.31 | 45.6 |
| Bra020112.1-P | Field mustard | nucleus | 42.82 | 45.51 |
| AT5G20610.1 | Thale cress | nucleus | 44.67 | 43.56 |
| KRH19252 | Soybean | nucleus | 29.34 | 42.58 |
| Bra002315.1-P | Field mustard | nucleus | 42.82 | 41.05 |
| Zm00001d043666_P001 | Maize | nucleus | 40.26 | 39.91 |
| OQU87417 | Sorghum | nucleus | 40.7 | 39.9 |
| TraesCS3D01G248600.1 | Wheat | nucleus | 39.82 | 39.82 |
| Zm00001d011716_P001 | Maize | nucleus | 40.18 | 39.72 |
| HORVU3Hr1G067440.1 | Barley | plastid | 34.1 | 38.89 |
| TraesCS3B01G277400.1 | Wheat | cytosol | 38.85 | 36.42 |
| Zm00001d042647_P001 | Maize | mitochondrion | 5.99 | 36.17 |
| Zm00001d044668_P001 | Maize | extracellular | 24.05 | 36.06 |
| PGSC0003DMT400021201 | Potato | cytosol | 34.71 | 35.59 |
| Zm00001d020517_P001 | Maize | mitochondrion | 11.1 | 26.03 |
| Zm00001d037913_P001 | Maize | plastid | 4.93 | 25.34 |
| PGSC0003DMT400037294 | Potato | cytosol | 17.53 | 22.46 |
Protein Annotations
| EntrezGene:102596501 | MapMan:20.5.6 | Gene3D:3.10.350.10 | ncoils:Coil | InterPro:IPR018392 | InterPro:IPR019448 |
| InterPro:IPR036779 | InterPro:LysM_dom | InterPro:LysM_dom_sf | UniProt:M1BVQ0 | InterPro:NT-C2 | PFAM:PF01476 |
| PFAM:PF10358 | EnsemblPlantsGene:PGSC0003DMG400020948 | PGSC:PGSC0003DMG400020948 | EnsemblPlants:PGSC0003DMT400053992 | PFscan:PS51782 | PFscan:PS51840 |
| PANTHER:PTHR33414 | PANTHER:PTHR33414:SF1 | SMART:SM00257 | SUPFAM:SSF54106 | UniParc:UPI0002961FBF | RefSeq:XP_006342346.1 |
| SEG:seg | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400020948]
Coordinates
chr7:+:37503174..37506676
Molecular Weight (calculated)
124625.0 Da
IEP (calculated)
4.737
GRAVY (calculated)
-0.543
Length
1135 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSKIGGNEKL LDDIEALNKA LYLDDKGGRR SLMLGASNRS MSVGKTHQKS KSKDDLSEKE SKKSIWSWKG LKSLAVRNKK FNCCFSVQVH SIEGLSTLFD
0101: ELCLVVHWKR RDGELTTRPV VVSKGIAEFE EQLTHTCSIS GSKNGPNQSA KYEAKHFLLY ASIYATPDLD LGKHRVDLTR LLPLALDELE ENSSGKWTTS
0201: FRLSGKAKGA TMNVSFEYHI VGKTFTVFPS NTSLLDVKNL RRNSENVAKI LAQCEQSDEL SKTMRRAGSL PARSSASQCS AENIKDLHEV LPVPSSELSI
0301: SVNVMYQKLE EEKVECSVDC KPQIDVSCDD VKTLKPNLAL LSEPEKGNIE NGDDLSEVSI RDQGIEVASE VWEGKEEETT KTGDTPSEEN AEPNSSFGMF
0401: NEEEPQLALL SKEVDTANDD LSVSTCNFET NESSKESIMK ELESALKRVS DLANEGLDSQ DDENEVINHD GGLDNKGNFG ELRKGKSLSL DYDAESVASD
0501: FLDMLGIEHT QFSPSSESEP DSPRERLLRQ FEKDTLADGC SLFNFDKDID HLEFACDAST GSDWRSIYED FDYSCNVDSY VEMPKIEIEA TSNKTGASML
0601: EDLETEALMY EWGLNERAFQ HSPPKSSSGF GSPIDIPLED PSQLPPLGEG LGPFIKTKNG GFLRSMNPSL FKNAKSGGSL IMQVSSPVVV PAEMGSGIMD
0701: ILQHLASIGI EKLSIQANKL MPLEDITGQT MQHIGWETAP SLDGTVRQDL LQHEFEFGQN MAGIQSNKGK LHRPKFSKLE SNSAGLDKDS EYVSLEDLAP
0801: LAMDKIEALS IEGLRIQSGM SDEDTPSNVS SKPIGEFSAI EGKEVNFGGA VGLEGTGGLQ LLDVKDNDGG GEVDGLMGLS LTLDEWMKLD AGEIDEISER
0901: TSKLLAAHHG TCTDLFRGRS KRRGKGKNCG LLGNSFTVAL MVQLRDPLRN YEPVGTPMLA LVQVERVFVT PKAKIYSTVS QVRKSNEDDD DNEILMPPKK
1001: EAGGVEVNED HIRDDEEIPQ YKITEVHVAG LKTEQGKKKL WGSSSQQQSG SRWLLANGMG KKNKHPLMKS KGGNKSSIAA ASSQATTTTV QPGETLWSIS
1101: SRVHGTGAKW EELAALNPHI RNPNVIFPNE KIRLR
0101: ELCLVVHWKR RDGELTTRPV VVSKGIAEFE EQLTHTCSIS GSKNGPNQSA KYEAKHFLLY ASIYATPDLD LGKHRVDLTR LLPLALDELE ENSSGKWTTS
0201: FRLSGKAKGA TMNVSFEYHI VGKTFTVFPS NTSLLDVKNL RRNSENVAKI LAQCEQSDEL SKTMRRAGSL PARSSASQCS AENIKDLHEV LPVPSSELSI
0301: SVNVMYQKLE EEKVECSVDC KPQIDVSCDD VKTLKPNLAL LSEPEKGNIE NGDDLSEVSI RDQGIEVASE VWEGKEEETT KTGDTPSEEN AEPNSSFGMF
0401: NEEEPQLALL SKEVDTANDD LSVSTCNFET NESSKESIMK ELESALKRVS DLANEGLDSQ DDENEVINHD GGLDNKGNFG ELRKGKSLSL DYDAESVASD
0501: FLDMLGIEHT QFSPSSESEP DSPRERLLRQ FEKDTLADGC SLFNFDKDID HLEFACDAST GSDWRSIYED FDYSCNVDSY VEMPKIEIEA TSNKTGASML
0601: EDLETEALMY EWGLNERAFQ HSPPKSSSGF GSPIDIPLED PSQLPPLGEG LGPFIKTKNG GFLRSMNPSL FKNAKSGGSL IMQVSSPVVV PAEMGSGIMD
0701: ILQHLASIGI EKLSIQANKL MPLEDITGQT MQHIGWETAP SLDGTVRQDL LQHEFEFGQN MAGIQSNKGK LHRPKFSKLE SNSAGLDKDS EYVSLEDLAP
0801: LAMDKIEALS IEGLRIQSGM SDEDTPSNVS SKPIGEFSAI EGKEVNFGGA VGLEGTGGLQ LLDVKDNDGG GEVDGLMGLS LTLDEWMKLD AGEIDEISER
0901: TSKLLAAHHG TCTDLFRGRS KRRGKGKNCG LLGNSFTVAL MVQLRDPLRN YEPVGTPMLA LVQVERVFVT PKAKIYSTVS QVRKSNEDDD DNEILMPPKK
1001: EAGGVEVNED HIRDDEEIPQ YKITEVHVAG LKTEQGKKKL WGSSSQQQSG SRWLLANGMG KKNKHPLMKS KGGNKSSIAA ASSQATTTTV QPGETLWSIS
1101: SRVHGTGAKW EELAALNPHI RNPNVIFPNE KIRLR
0001: MSKVNSEESS SSQKLLKEVE KISEALYVNK NPRGSVAGSN KTPTKPLSRS NLAEPKEKKS FWNWPLRAIN HVRNRRFNCC FSAQVHSIEG LPPIFQDLSL
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
Arabidopsis Description
PMIR1Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:F4K5K6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.