Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G067440.1 | Barley | plastid | 78.06 | 89.05 |
| TraesCS3B01G277400.1 | Wheat | cytosol | 88.55 | 82.99 |
| Os01t0714100-01 | Rice | cytosol | 25.99 | 74.68 |
| Zm00001d043666_P001 | Maize | nucleus | 73.22 | 72.58 |
| Zm00001d011716_P001 | Maize | nucleus | 72.51 | 71.69 |
| OQU87417 | Sorghum | nucleus | 72.6 | 71.16 |
| Zm00001d042647_P001 | Maize | mitochondrion | 10.22 | 61.7 |
| VIT_11s0016g01610.t01 | Wine grape | cytosol | 12.86 | 57.94 |
| Zm00001d037913_P001 | Maize | plastid | 10.93 | 56.11 |
| Zm00001d020517_P001 | Maize | mitochondrion | 22.91 | 53.72 |
| GSMUA_Achr1P05230_001 | Banana | nucleus | 46.17 | 47.85 |
| Solyc07g041180.2.1 | Tomato | nucleus | 40.0 | 40.18 |
| VIT_11s0016g01690.t01 | Wine grape | cytosol | 41.32 | 39.88 |
| PGSC0003DMT400053992 | Potato | nucleus | 39.82 | 39.82 |
| CDY16548 | Canola | nucleus | 36.04 | 39.67 |
| Solyc05g032750.2.1 | Tomato | nucleus | 38.41 | 39.49 |
| Bra020112.1-P | Field mustard | nucleus | 36.74 | 39.04 |
| CDY45081 | Canola | nucleus | 36.48 | 39.02 |
| PGSC0003DMT400028119 | Potato | cytosol | 39.21 | 38.86 |
| KRH12468 | Soybean | cytosol | 37.97 | 38.55 |
| CDX92449 | Canola | nucleus | 33.04 | 38.27 |
| KRH02657 | Soybean | nucleus | 5.9 | 36.81 |
| KRH37453 | Soybean | cytosol | 39.12 | 36.3 |
| AT5G20610.1 | Thale cress | nucleus | 36.74 | 35.82 |
| Bra002315.1-P | Field mustard | nucleus | 37.0 | 35.47 |
| KRH19252 | Soybean | nucleus | 24.23 | 35.17 |
| TraesCS5D01G362300.1 | Wheat | cytosol | 17.89 | 23.23 |
| TraesCS1D01G204800.1 | Wheat | cytosol | 15.68 | 22.0 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G248600.1 | EnsemblPlantsGene:TraesCS3D01G248600 | InterPro:IPR019448 | InterPro:NT-C2 | PANTHER:PTHR33414 | PANTHER:PTHR33414:SF1 |
| PFscan:PS51840 | SEG:seg | MapMan:20.5.6 | : | : | : |
Description
No Description!
Coordinates
chr3D:+:347572995..347576490
Molecular Weight (calculated)
122343.0 Da
IEP (calculated)
4.719
GRAVY (calculated)
-0.430
Length
1135 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSRRPPADR AAEAGDAALA RDIVTLHKAL SLDPSRRRRS LPLPAAPSPS AADQARNKPK LKPSSSSRKL LPSASYYSSV STSSSSSFWK KSLTAISHLG
0101: RRRLDCAFTL QVHSVDGLPT ALDGSPVSVH FRRMSACAST RPVAPALGAV AFEEPLTQRS PVYFSRGAKN AVKYEPRAFV VTVAASALEL GKHEVDLTRL
0201: LPLSIDDLEE GGDSGFGKWS TSFRLSGVAR GARLNVTFSC VLVGGGGEQH KGGEVAGLRR GSMARQVSVQ SPSPVPARSR DVRVLHEVLP STRPVKALPF
0301: VGDAGLDATK GETATVECEE DGSPQSKHCT SVEVRKGEGD LVHPEGDCHG SEFNVVEQGV EVTLEDPDQF KHVETANVND QDEGFSGEAN EEGIAKPALL
0401: IDDLSKEDTV EVKLEEELSD VALEMDDVGD KQDASVQAAL LPTDAFEKDG ELAADTELEV LEGIFNKFSI VEPEEFDSPI IEDKHSRRLS CIGVEDGCNS
0501: TSRKSRSRSM DASSDFVANE FLDMLGIAHS PFGVTSDSDP ESPRERLWKQ FEKEALESGD CILGLNFEDG VEEPSCEDVA EDFDLSTIIR EAELELQNVV
0601: PPIDTTFRAK SLEDEETEAL MRQFGLNEKS FQSSPPGSRS GFGSPIALPP EQPLELPPLA DGLGPFIQTE DGGFLRSMNP VLFKNAKNNC SLVMQASSPI
0701: VLPAEMGSGI MEILHGLASV GIEKLSMQAN KLMPLEDVNG KMMQQLAWEA SPALESSGRY DLLENHSLDA LAAGASNAAS GKKKKARGAD LSSSLGAISA
0801: SEYVSLEDLA PLAMEKIEAL SIEGLRIQSG MSEEEAPSNI SAHPIGEISS LQGKSAENTL SLGLEGTAGL QLLDVKQTGG DVDGLMGLSI TLDEWMRLDS
0901: GVVDEEEQFS DRTSKILAAH HAKSMDLLGE GQTADKKSRR SGRRWGLLGN NFTVALMVQL RDPLRNYEPV GTPMLSLIQV ERVFIPPKPK IYSTLSEKGN
1001: SEQDYEEEPN PEQVLDKASV DEEKIGQDSV PQFKVTEVHL AGFKSEPEKT KPWGNQTQQQ SGSRWLLGAG MGKGSKHPLI KSKATAKATK DAAGQQGDTL
1101: WSISSRVHGA GTRWGELTGS KRNPNILLQK DKRFR
0101: RRRLDCAFTL QVHSVDGLPT ALDGSPVSVH FRRMSACAST RPVAPALGAV AFEEPLTQRS PVYFSRGAKN AVKYEPRAFV VTVAASALEL GKHEVDLTRL
0201: LPLSIDDLEE GGDSGFGKWS TSFRLSGVAR GARLNVTFSC VLVGGGGEQH KGGEVAGLRR GSMARQVSVQ SPSPVPARSR DVRVLHEVLP STRPVKALPF
0301: VGDAGLDATK GETATVECEE DGSPQSKHCT SVEVRKGEGD LVHPEGDCHG SEFNVVEQGV EVTLEDPDQF KHVETANVND QDEGFSGEAN EEGIAKPALL
0401: IDDLSKEDTV EVKLEEELSD VALEMDDVGD KQDASVQAAL LPTDAFEKDG ELAADTELEV LEGIFNKFSI VEPEEFDSPI IEDKHSRRLS CIGVEDGCNS
0501: TSRKSRSRSM DASSDFVANE FLDMLGIAHS PFGVTSDSDP ESPRERLWKQ FEKEALESGD CILGLNFEDG VEEPSCEDVA EDFDLSTIIR EAELELQNVV
0601: PPIDTTFRAK SLEDEETEAL MRQFGLNEKS FQSSPPGSRS GFGSPIALPP EQPLELPPLA DGLGPFIQTE DGGFLRSMNP VLFKNAKNNC SLVMQASSPI
0701: VLPAEMGSGI MEILHGLASV GIEKLSMQAN KLMPLEDVNG KMMQQLAWEA SPALESSGRY DLLENHSLDA LAAGASNAAS GKKKKARGAD LSSSLGAISA
0801: SEYVSLEDLA PLAMEKIEAL SIEGLRIQSG MSEEEAPSNI SAHPIGEISS LQGKSAENTL SLGLEGTAGL QLLDVKQTGG DVDGLMGLSI TLDEWMRLDS
0901: GVVDEEEQFS DRTSKILAAH HAKSMDLLGE GQTADKKSRR SGRRWGLLGN NFTVALMVQL RDPLRNYEPV GTPMLSLIQV ERVFIPPKPK IYSTLSEKGN
1001: SEQDYEEEPN PEQVLDKASV DEEKIGQDSV PQFKVTEVHL AGFKSEPEKT KPWGNQTQQQ SGSRWLLGAG MGKGSKHPLI KSKATAKATK DAAGQQGDTL
1101: WSISSRVHGA GTRWGELTGS KRNPNILLQK DKRFR
0001: MSKVNSEESS SSQKLLKEVE KISEALYVNK NPRGSVAGSN KTPTKPLSRS NLAEPKEKKS FWNWPLRAIN HVRNRRFNCC FSAQVHSIEG LPPIFQDLSL
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
Arabidopsis Description
PMIR1Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:F4K5K6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.