Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G248600.1 | Wheat | nucleus | 82.99 | 88.55 |
| HORVU3Hr1G067440.1 | Barley | plastid | 70.6 | 85.93 |
| Os01t0714100-01 | Rice | cytosol | 24.44 | 74.94 |
| Zm00001d043666_P001 | Maize | nucleus | 66.64 | 70.48 |
| Zm00001d011716_P001 | Maize | nucleus | 66.64 | 70.3 |
| OQU87417 | Sorghum | nucleus | 66.14 | 69.17 |
| Zm00001d042647_P001 | Maize | mitochondrion | 9.5 | 61.17 |
| VIT_11s0016g01610.t01 | Wine grape | cytosol | 11.81 | 56.75 |
| Zm00001d037913_P001 | Maize | plastid | 10.32 | 56.56 |
| Zm00001d020517_P001 | Maize | mitochondrion | 21.47 | 53.72 |
| GSMUA_Achr1P05230_001 | Banana | nucleus | 43.19 | 47.76 |
| Solyc05g032750.2.1 | Tomato | nucleus | 36.91 | 40.49 |
| VIT_11s0016g01690.t01 | Wine grape | cytosol | 39.22 | 40.39 |
| Solyc07g041180.2.1 | Tomato | nucleus | 36.75 | 39.38 |
| PGSC0003DMT400028119 | Potato | cytosol | 36.75 | 38.86 |
| PGSC0003DMT400053992 | Potato | nucleus | 36.42 | 38.85 |
| CDY16548 | Canola | nucleus | 32.78 | 38.51 |
| Bra020112.1-P | Field mustard | nucleus | 33.94 | 38.48 |
| CDY45081 | Canola | nucleus | 33.69 | 38.45 |
| KRH12468 | Soybean | cytosol | 35.01 | 37.92 |
| CDX92449 | Canola | nucleus | 30.64 | 37.86 |
| KRH02657 | Soybean | nucleus | 5.62 | 37.36 |
| KRH37453 | Soybean | cytosol | 36.58 | 36.22 |
| AT5G20610.1 | Thale cress | nucleus | 34.35 | 35.74 |
| KRH19252 | Soybean | nucleus | 22.38 | 34.65 |
| Bra002315.1-P | Field mustard | nucleus | 33.61 | 34.38 |
| TraesCS5B01G357200.1 | Wheat | cytosol | 16.52 | 22.83 |
| TraesCS1B01G215700.1 | Wheat | cytosol | 15.03 | 22.47 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G277400.1 | EnsemblPlantsGene:TraesCS3B01G277400 | InterPro:IPR019448 | InterPro:NT-C2 | PANTHER:PTHR33414 | PANTHER:PTHR33414:SF1 |
| PFscan:PS51840 | SEG:seg | MapMan:20.5.6 | : | : | : |
Description
No Description!
Coordinates
chr3B:+:447285976..447289699
Molecular Weight (calculated)
120770.0 Da
IEP (calculated)
4.767
GRAVY (calculated)
-0.412
Length
1211 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSRRPPADR AAEAGDXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0101: XXXXXXXPSR RRRSLPLPAP SPSAADQARH KPKLKPSSSS RKLLPSASYS SSVSTSSSSS SSSSSSFWKK SLTAISHLGR RRLDCAFTLQ VHSVDGLPTA
0201: LDGSPISVHF RRMSACASTR PVAPALGAVA FEEPLTQRSP VYFSRGAKNA VKYEPRAFVV TVAASALELG KHEVDLTRLL PLSIGDLEEG GDSGFGKWST
0301: SFRLSGVARG ARLNVTFSCV LLGGGGEQHK GGEVAGLRRG SMARQVSVQS PSPVPARSRD VRVLHEVLPS TRPVKALPFV GDAGLDATKG ETTTVECEED
0401: GSPQSKHCTS VEVRKGEGDL VHPEGDCHGS EFNVVEQGVE VTLEDPDQFK HVETANVNDQ DDDLRGEAYE EGTAKPALLI EDLAKEETVE KKLSDVALEM
0501: DDVGDKQDAS VQAALLPTAA FEKDGELAAD TELEVLEGIF NKFSIVEPEE FDSPIVEDKH SRRLSCIGME DGCSSASRLS RSRSMDASSD FVANEFLDML
0601: GIAHSPFGVT SDSDPESPRE RLWKQFEKEA LESGDCILGL DFEDEVEEPS SEDVAEDFDL STIIREAELE LQNVVPPIDT TFRAKSLEDE ETEALMRQFG
0701: LNEKSFQSSP PGSRSGFGSP IALPPEQPLE LPPLADGLGP FIQTEDGGFL RSMNLVLFKN AKNNCSLVMQ ASSPIVLPAE MGSGIMEILH GLASVGIEKL
0801: SMQANKLMPL EDVNGKMMQQ LAWEASPALE SSGRYDLLEN HSLDALAAGA SNAASGKKKK KGRGADLSSS LGSISASEYV SLEDLAPLAM EKIEALSIEG
0901: LRIQSGMSEE EAPSNISAHP IGEISSLQGK SAENALSLGL EGTAGLQLLD VKQTGGDVDG LMGLSITLDE WMRLDSGVVD EEEQFSDRTS KILAAHRAKS
1001: MDLLGEGQTA DKKSRRSGRR WGLLGNNFTV ALMVQLRDPL RNYEPVGTPM LSLIQVERVF IPPKPKIYST VSEKGNSEQD YEEPNPEQIL DKSSVVDEEK
1101: MEEDSVAQFK VTEVHVAGFK SEPEKIKPWG NQTQQQSGSR WLLGAGMGKG SKHPLMKSKA TAKATKDAAG QQGDTLWSIS SRVHGAGTRW GELTGSKRNP
1201: NILLQKDKRF R
0101: XXXXXXXPSR RRRSLPLPAP SPSAADQARH KPKLKPSSSS RKLLPSASYS SSVSTSSSSS SSSSSSFWKK SLTAISHLGR RRLDCAFTLQ VHSVDGLPTA
0201: LDGSPISVHF RRMSACASTR PVAPALGAVA FEEPLTQRSP VYFSRGAKNA VKYEPRAFVV TVAASALELG KHEVDLTRLL PLSIGDLEEG GDSGFGKWST
0301: SFRLSGVARG ARLNVTFSCV LLGGGGEQHK GGEVAGLRRG SMARQVSVQS PSPVPARSRD VRVLHEVLPS TRPVKALPFV GDAGLDATKG ETTTVECEED
0401: GSPQSKHCTS VEVRKGEGDL VHPEGDCHGS EFNVVEQGVE VTLEDPDQFK HVETANVNDQ DDDLRGEAYE EGTAKPALLI EDLAKEETVE KKLSDVALEM
0501: DDVGDKQDAS VQAALLPTAA FEKDGELAAD TELEVLEGIF NKFSIVEPEE FDSPIVEDKH SRRLSCIGME DGCSSASRLS RSRSMDASSD FVANEFLDML
0601: GIAHSPFGVT SDSDPESPRE RLWKQFEKEA LESGDCILGL DFEDEVEEPS SEDVAEDFDL STIIREAELE LQNVVPPIDT TFRAKSLEDE ETEALMRQFG
0701: LNEKSFQSSP PGSRSGFGSP IALPPEQPLE LPPLADGLGP FIQTEDGGFL RSMNLVLFKN AKNNCSLVMQ ASSPIVLPAE MGSGIMEILH GLASVGIEKL
0801: SMQANKLMPL EDVNGKMMQQ LAWEASPALE SSGRYDLLEN HSLDALAAGA SNAASGKKKK KGRGADLSSS LGSISASEYV SLEDLAPLAM EKIEALSIEG
0901: LRIQSGMSEE EAPSNISAHP IGEISSLQGK SAENALSLGL EGTAGLQLLD VKQTGGDVDG LMGLSITLDE WMRLDSGVVD EEEQFSDRTS KILAAHRAKS
1001: MDLLGEGQTA DKKSRRSGRR WGLLGNNFTV ALMVQLRDPL RNYEPVGTPM LSLIQVERVF IPPKPKIYST VSEKGNSEQD YEEPNPEQIL DKSSVVDEEK
1101: MEEDSVAQFK VTEVHVAGFK SEPEKIKPWG NQTQQQSGSR WLLGAGMGKG SKHPLMKSKA TAKATKDAAG QQGDTLWSIS SRVHGAGTRW GELTGSKRNP
1201: NILLQKDKRF R
0001: MSKVNSEESS SSQKLLKEVE KISEALYVNK NPRGSVAGSN KTPTKPLSRS NLAEPKEKKS FWNWPLRAIN HVRNRRFNCC FSAQVHSIEG LPPIFQDLSL
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
Arabidopsis Description
PMIR1Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:F4K5K6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.