Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G362300.1 | Wheat | cytosol | 97.6 | 97.83 |
| TraesCS5A01G355000.1 | Wheat | cytosol | 94.98 | 95.19 |
| HORVU5Hr1G079950.1 | Barley | cytosol | 90.98 | 90.36 |
| Os09t0553900-01 | Rice | plasma membrane | 70.78 | 70.22 |
| Zm00001d021416_P001 | Maize | cytosol | 62.1 | 68.95 |
| OQU89905 | Sorghum | plastid | 66.67 | 60.14 |
| GSMUA_Achr11P... | Banana | extracellular | 44.41 | 56.79 |
| VIT_18s0122g00830.t01 | Wine grape | nucleus | 48.86 | 49.83 |
| KRH60483 | Soybean | nucleus | 47.37 | 48.54 |
| KRH09253 | Soybean | cytosol | 46.8 | 47.62 |
| KRH38751 | Soybean | cytosol | 46.46 | 47.44 |
| KRH41783 | Soybean | nucleus | 47.26 | 47.15 |
| PGSC0003DMT400037294 | Potato | cytosol | 46.69 | 46.16 |
| CDY35798 | Canola | cytosol | 42.58 | 46.11 |
| Bra034929.1-P | Field mustard | cytosol | 43.38 | 45.73 |
| Solyc10g006330.2.1 | Tomato | cytosol, nucleus | 46.0 | 45.64 |
| CDX80727 | Canola | cytosol | 41.9 | 45.53 |
| AT1G42550.1 | Thale cress | nucleus | 43.49 | 45.2 |
| Bra034930.1-P | Field mustard | cytosol | 30.94 | 44.87 |
| TraesCS1B01G215700.1 | Wheat | cytosol | 38.36 | 41.48 |
| TraesCS3B01G277400.1 | Wheat | cytosol | 22.83 | 16.52 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G357200.1 | EnsemblPlantsGene:TraesCS5B01G357200 | GO:GO:0008150 | GO:GO:0009902 | GO:GO:0009987 | GO:GO:0016043 |
| InterPro:IPR019448 | InterPro:NT-C2 | InterPro:PMI1 | ncoils:Coil | PANTHER:PTHR33414 | PANTHER:PTHR33414:SF2 |
| PFAM:PF10358 | PFscan:PS51840 | SEG:seg | MapMan:20.5.5 | : | : |
Description
No Description!
Coordinates
chr5B:-:536587125..536589755
Molecular Weight (calculated)
93118.8 Da
IEP (calculated)
4.827
GRAVY (calculated)
-0.409
Length
876 amino acids
Sequence
(BLAST)
(BLAST)
001: MADDGKPRDQ TLQELDALSH TLYQAHSNRR HASLALPRGV VGEDVLAAEA LRAEAARPRT RRMSMTSPFR SRGKAGKKED DDEDDDRGVL SAAAPSKSRS
101: FAAAASPALG GGEKKKGLWG WKPMRALSHI GMTRLGCLFS VEVAVAQGLP SSMDGLRLAV AVRKKESREG AVQTMPSRVQ QGAADFEETL FVRCHVYCSG
201: GGAGKPPAKF EPRPFLLSVV AVDAPELDLG QSTVDVSALV KESTEKSQQG ERVRQWQMAF PLAGKAKGGE LVVTLAFQIM EDGGVGLYSQ PATKTAASSS
301: TSSALFARKQ SKTSFSITSP KVTRSEPSFT PAKGTPAQDL SGIDDFKLDG PSAPVPEPKQ DQKREPEPEP EAKVDDSEFP EFDFDVVDKG VEGQEEKDEA
401: NADSKKEDKD KEEEEEGTTP AAGDEVVKEV VHDSASMWRL NELEAITNQI KALESLMLGD TPEEDADKPA EPQEDEAAVE GLEADEEEVT REFLQLLEQG
501: EDNGKSAAAP QVSSLKSSAK PGTGADEACY ISDLGKGLGP IVQTRDGGYL AATNPFDIPV VRKELPKLAM QLSKPFILRG QKLPGGGAEV FQRLCAGGCE
601: ALCAKLGALT ATDEVVGKTA EQIAFEGMAS AIISARSKEL GASSSAAESV SLLRTMSAAM SDGRKERIAT GIWNAHEAPV TVDEILPFSL QKIETMAIEA
701: LKVQAGTAEE QAPFDVSPVT DAADGGHPLD AAVPPEEWAS ACAGADAATM LVVAQLRDPM RRYEAVGAPS IVVIQAGRAA TGADGETRFK VANMHVGGMR
801: LKTADRRSVW DGERQRLTAT HWLVAYGLGK AGKKGRPSGA AAGKVGTDVL WSMSSRVVAD MWLKPMRNPD VKIAAN
101: FAAAASPALG GGEKKKGLWG WKPMRALSHI GMTRLGCLFS VEVAVAQGLP SSMDGLRLAV AVRKKESREG AVQTMPSRVQ QGAADFEETL FVRCHVYCSG
201: GGAGKPPAKF EPRPFLLSVV AVDAPELDLG QSTVDVSALV KESTEKSQQG ERVRQWQMAF PLAGKAKGGE LVVTLAFQIM EDGGVGLYSQ PATKTAASSS
301: TSSALFARKQ SKTSFSITSP KVTRSEPSFT PAKGTPAQDL SGIDDFKLDG PSAPVPEPKQ DQKREPEPEP EAKVDDSEFP EFDFDVVDKG VEGQEEKDEA
401: NADSKKEDKD KEEEEEGTTP AAGDEVVKEV VHDSASMWRL NELEAITNQI KALESLMLGD TPEEDADKPA EPQEDEAAVE GLEADEEEVT REFLQLLEQG
501: EDNGKSAAAP QVSSLKSSAK PGTGADEACY ISDLGKGLGP IVQTRDGGYL AATNPFDIPV VRKELPKLAM QLSKPFILRG QKLPGGGAEV FQRLCAGGCE
601: ALCAKLGALT ATDEVVGKTA EQIAFEGMAS AIISARSKEL GASSSAAESV SLLRTMSAAM SDGRKERIAT GIWNAHEAPV TVDEILPFSL QKIETMAIEA
701: LKVQAGTAEE QAPFDVSPVT DAADGGHPLD AAVPPEEWAS ACAGADAATM LVVAQLRDPM RRYEAVGAPS IVVIQAGRAA TGADGETRFK VANMHVGGMR
801: LKTADRRSVW DGERQRLTAT HWLVAYGLGK AGKKGRPSGA AAGKVGTDVL WSMSSRVVAD MWLKPMRNPD VKIAAN
001: MAGEYSGSRS SNTQLLAELE ALSENLYQKP QVSVGNRRTN SLALPRSSVP SLVTSADEVS TARAEDLTVS KPRARRLSLS PWRSRPKLEV EEEENVTQSN
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
Arabidopsis Description
PMI1Protein PLASTID MOVEMENT IMPAIRED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.