Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034929.1-P | Field mustard | cytosol | 98.84 | 71.84 |
| CDY35798 | Canola | cytosol | 94.7 | 70.7 |
| AT1G42550.1 | Thale cress | nucleus | 85.1 | 60.97 |
| HORVU5Hr1G087920.1 | Barley | cytosol | 6.46 | 43.82 |
| HORVU5Hr1G087970.1 | Barley | cytosol, plastid | 35.43 | 41.0 |
| HORVU5Hr1G087930.1 | Barley | cytosol | 26.16 | 38.92 |
| VIT_18s0122g00830.t01 | Wine grape | nucleus | 55.3 | 38.88 |
| GSMUA_Achr11P... | Banana | extracellular | 43.38 | 38.25 |
| KRH60483 | Soybean | nucleus | 51.66 | 36.49 |
| KRH38751 | Soybean | cytosol | 51.49 | 36.25 |
| KRH09253 | Soybean | cytosol | 50.17 | 35.19 |
| Solyc10g006330.2.1 | Tomato | cytosol, nucleus | 51.16 | 34.99 |
| KRH41783 | Soybean | nucleus | 50.5 | 34.74 |
| PGSC0003DMT400037294 | Potato | cytosol | 50.66 | 34.54 |
| Zm00001d021416_P001 | Maize | cytosol | 44.54 | 34.09 |
| GSMUA_Achr1P02110_001 | Banana | extracellular | 37.25 | 33.33 |
| GSMUA_Achr5P11690_001 | Banana | endoplasmic reticulum, golgi | 35.1 | 32.17 |
| TraesCS5D01G362300.1 | Wheat | cytosol | 45.2 | 31.24 |
| TraesCS5B01G357200.1 | Wheat | cytosol | 44.87 | 30.94 |
| TraesCS5A01G355000.1 | Wheat | cytosol | 44.54 | 30.78 |
| HORVU5Hr1G079950.1 | Barley | cytosol | 44.7 | 30.61 |
| Os09t0553900-01 | Rice | plasma membrane | 43.71 | 29.9 |
| TraesCS1B01G215700.1 | Wheat | cytosol | 38.58 | 28.77 |
| TraesCS1A01G201400.1 | Wheat | cytosol | 38.41 | 28.54 |
| HORVU1Hr1G052010.1 | Barley | cytosol | 37.91 | 28.2 |
| TraesCS1D01G204800.1 | Wheat | cytosol | 37.75 | 28.18 |
| Os10t0539700-01 | Rice | cytosol, plasma membrane | 38.41 | 27.88 |
| Zm00001d029761_P001 | Maize | cytosol | 37.91 | 27.26 |
| EER94579 | Sorghum | cytosol, nucleus, plastid | 38.74 | 27.18 |
| OQU89905 | Sorghum | plastid | 43.38 | 26.98 |
| Bra009884.1-P | Field mustard | nucleus | 20.03 | 13.67 |
| Bra020112.1-P | Field mustard | nucleus | 23.01 | 13.02 |
| Bra002315.1-P | Field mustard | nucleus | 22.19 | 11.32 |
Protein Annotations
| EnsemblPlants:Bra034930.1 | EnsemblPlants:Bra034930.1-P | EnsemblPlantsGene:Bra034930 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0009902 | GO:GO:0009987 | GO:GO:0016043 | InterPro:PMI1 | PANTHER:PTHR33414 | PANTHER:PTHR33414:SF2 |
| SEG:seg | UniParc:UPI000254725B | UniProt:M4F1I4 | MapMan:20.5.5 | : | : |
Description
AT1G42550 (E=2e-270) PMI1 | PMI1 (PLASTID MOVEMENT IMPAIRED1)
Coordinates
chrA08:+:5178339..5180153
Molecular Weight (calculated)
67193.4 Da
IEP (calculated)
4.563
GRAVY (calculated)
-0.662
Length
604 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDLSDLIQE SVEKMSYEGA RVRQWDMSWG LSGKAKGGEL VLKLGFQIME KDGGAGIYGK QGELGIKPSS KPKNFSGSFG RKQSKTSFSV PSPKMTSQSQ
101: TWTPASGVEA ASDLQRIEHL NLDDPEEKPA PKTEEPEQRV EEDDQEPPDF EVVDKGVEFD DDVETEESDG TIGERSFGTK EQHVNVDDPR HMIRLTELDS
201: IAKQIKALES MMKDDRNGEE GERESPRLDE EEQTVTKEFL QLLEDEESEN LKFYQHKMEI SELRSGESVE EESENYLSDL GKGIGCVVQT RDGGYLVSMN
301: PFDTVVMRKD TPKLVMQISK QIVVLPEAGS ATGFELFHRM AGSGKELDSK ICSLMAMDEL MGKTGEQVAF EGIASAIIQG RNKERANTSA ARTVAAVKTM
401: ANAMNSGRRE RIMTGIWNVE ENPLASAEEV LAVSLQKLEE MVIEGLKIQA DMVEDDAPFE VSAAKGQPNP LESTIPLDEW LKENRKQKTL TVFATVQLRD
501: PTRRYEAVGG TVVVAVQAED QEDGLKVGSL HVGGVKSNGA EKRRLTAAQW LVEYGMGKKG KKKSNVKRKE KEEEDEELLW SLSSRVMADM WLKSIRNPDV
601: KLHC
101: TWTPASGVEA ASDLQRIEHL NLDDPEEKPA PKTEEPEQRV EEDDQEPPDF EVVDKGVEFD DDVETEESDG TIGERSFGTK EQHVNVDDPR HMIRLTELDS
201: IAKQIKALES MMKDDRNGEE GERESPRLDE EEQTVTKEFL QLLEDEESEN LKFYQHKMEI SELRSGESVE EESENYLSDL GKGIGCVVQT RDGGYLVSMN
301: PFDTVVMRKD TPKLVMQISK QIVVLPEAGS ATGFELFHRM AGSGKELDSK ICSLMAMDEL MGKTGEQVAF EGIASAIIQG RNKERANTSA ARTVAAVKTM
401: ANAMNSGRRE RIMTGIWNVE ENPLASAEEV LAVSLQKLEE MVIEGLKIQA DMVEDDAPFE VSAAKGQPNP LESTIPLDEW LKENRKQKTL TVFATVQLRD
501: PTRRYEAVGG TVVVAVQAED QEDGLKVGSL HVGGVKSNGA EKRRLTAAQW LVEYGMGKKG KKKSNVKRKE KEEEDEELLW SLSSRVMADM WLKSIRNPDV
601: KLHC
001: MAGEYSGSRS SNTQLLAELE ALSENLYQKP QVSVGNRRTN SLALPRSSVP SLVTSADEVS TARAEDLTVS KPRARRLSLS PWRSRPKLEV EEEENVTQSN
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
Arabidopsis Description
PMI1Protein PLASTID MOVEMENT IMPAIRED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.