Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G362300.1 | Wheat | cytosol | 95.31 | 95.31 |
| TraesCS5B01G357200.1 | Wheat | cytosol | 95.19 | 94.98 |
| HORVU5Hr1G079950.1 | Barley | cytosol | 89.93 | 89.12 |
| Os09t0553900-01 | Rice | plasma membrane | 71.17 | 70.44 |
| Zm00001d021416_P001 | Maize | cytosol | 63.16 | 69.96 |
| OQU89905 | Sorghum | plastid | 67.05 | 60.35 |
| GSMUA_Achr11P... | Banana | extracellular | 43.94 | 56.06 |
| VIT_18s0122g00830.t01 | Wine grape | nucleus | 48.74 | 49.59 |
| KRH60483 | Soybean | nucleus | 47.6 | 48.66 |
| KRH09253 | Soybean | cytosol | 46.68 | 47.39 |
| KRH38751 | Soybean | cytosol | 46.45 | 47.32 |
| KRH41783 | Soybean | nucleus | 47.14 | 46.92 |
| CDY35798 | Canola | cytosol | 42.91 | 46.35 |
| CDX80727 | Canola | cytosol | 42.45 | 46.03 |
| Bra034929.1-P | Field mustard | cytosol | 43.59 | 45.85 |
| PGSC0003DMT400037294 | Potato | cytosol | 46.34 | 45.71 |
| AT1G42550.1 | Thale cress | nucleus | 43.94 | 45.55 |
| Solyc10g006330.2.1 | Tomato | cytosol, nucleus | 45.65 | 45.19 |
| Bra034930.1-P | Field mustard | cytosol | 30.78 | 44.54 |
| TraesCS1A01G201400.1 | Wheat | cytosol | 37.87 | 40.71 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G355000.1 | EnsemblPlantsGene:TraesCS5A01G355000 | GO:GO:0008150 | GO:GO:0009902 | GO:GO:0009987 | GO:GO:0016043 |
| InterPro:IPR019448 | InterPro:NT-C2 | InterPro:PMI1 | ncoils:Coil | PANTHER:PTHR33414 | PANTHER:PTHR33414:SF2 |
| PFAM:PF10358 | PFscan:PS51840 | SEG:seg | MapMan:20.5.5 | : | : |
Description
No Description!
Coordinates
chr5A:-:557127076..557129700
Molecular Weight (calculated)
93029.6 Da
IEP (calculated)
4.850
GRAVY (calculated)
-0.407
Length
874 amino acids
Sequence
(BLAST)
(BLAST)
001: MADDGKPRDQ TLQELDALSH TLYQAHSNRR HASLALPRGV VGEDVVTAEA LRAEVARPRT RRLSMTSPFR SRGKAGKKDD DDEDDDRGSL RAAAPSKSRS
101: FAAAVSPALG GGEKKKGLWG WKPMRALSHI GMTRLGCLFS VEVAAAQGLP SSMDGLRLAV AVRKKESREG AVQTMPSRVQ QGAADFEETL FVRCHVYCSG
201: GGAGKPPAKF EPRPFLLSVV AVDAPELDLG QSSVDLSALV KESTEKSQQG ERVRQWQMAF PLAGKAKGGE LVVTLAFQIM EDGGVGLYSQ PATKTAASSS
301: SSSSALFARK QSKTSFSITS PKVTRSEPSF TPAKGTPSQD LSGIDDFKLD GPSTPVPEPK QEQKKEPEPE AKADDSEFTE FDFDVVDKGV EGQEEKDEAN
401: ADSKKEDKEA EEEESATPAA GDEVVKEVVH DSASMWRLNE LEAITNQIKA LESLMLGDTL EEEADKPAEP QEDEAAVEGL EADEEEVTRE FLQLLEQGEG
501: NGKSSTAPQV SSLKSSAKPG TGADEACYVS DLGKGLGPIV QTRDGGYLAA TNPFDIPVVR KELPKLAMQL SKPFILRGQK LPGGGAEVFQ RLCAGGCEAL
601: CEKLGALTAT DEVVGKTAEQ IAFEGMASAI ISARSKELGA SSSAAESVSL LRTMSAAMSD GRQERITTGI WNAHEAPVTA DEILPFSLQK IETMAIEALK
701: VQAGVAEEQA PFDVSPVTDA VDAGHPLDAA VPPEEWASAC AGADAVTMLV VAQLRDPMRR YEAVGAPSIV VIQAGRAGTG ADGETRFKVA NMHVGGMRLK
801: TADRRNVWDG ERQRLTATHW LVAYGLGKAG KKGRPSGAAA GKIGTDVLWS MSSRVVADMW LKPMRNPDVK IAAN
101: FAAAVSPALG GGEKKKGLWG WKPMRALSHI GMTRLGCLFS VEVAAAQGLP SSMDGLRLAV AVRKKESREG AVQTMPSRVQ QGAADFEETL FVRCHVYCSG
201: GGAGKPPAKF EPRPFLLSVV AVDAPELDLG QSSVDLSALV KESTEKSQQG ERVRQWQMAF PLAGKAKGGE LVVTLAFQIM EDGGVGLYSQ PATKTAASSS
301: SSSSALFARK QSKTSFSITS PKVTRSEPSF TPAKGTPSQD LSGIDDFKLD GPSTPVPEPK QEQKKEPEPE AKADDSEFTE FDFDVVDKGV EGQEEKDEAN
401: ADSKKEDKEA EEEESATPAA GDEVVKEVVH DSASMWRLNE LEAITNQIKA LESLMLGDTL EEEADKPAEP QEDEAAVEGL EADEEEVTRE FLQLLEQGEG
501: NGKSSTAPQV SSLKSSAKPG TGADEACYVS DLGKGLGPIV QTRDGGYLAA TNPFDIPVVR KELPKLAMQL SKPFILRGQK LPGGGAEVFQ RLCAGGCEAL
601: CEKLGALTAT DEVVGKTAEQ IAFEGMASAI ISARSKELGA SSSAAESVSL LRTMSAAMSD GRQERITTGI WNAHEAPVTA DEILPFSLQK IETMAIEALK
701: VQAGVAEEQA PFDVSPVTDA VDAGHPLDAA VPPEEWASAC AGADAVTMLV VAQLRDPMRR YEAVGAPSIV VIQAGRAGTG ADGETRFKVA NMHVGGMRLK
801: TADRRNVWDG ERQRLTATHW LVAYGLGKAG KKGRPSGAAA GKIGTDVLWS MSSRVVADMW LKPMRNPDVK IAAN
001: MAGEYSGSRS SNTQLLAELE ALSENLYQKP QVSVGNRRTN SLALPRSSVP SLVTSADEVS TARAEDLTVS KPRARRLSLS PWRSRPKLEV EEEENVTQSN
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
Arabidopsis Description
PMI1Protein PLASTID MOVEMENT IMPAIRED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.