Factsheet for GSMUA_Achr11P07410_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G087920.1	Barley	cytosol	7.59	58.43
GSMUA_Achr1P02110_001	Banana	extracellular	50.51	51.26
GSMUA_Achr5P11690_001	Banana	endoplasmic reticulum, golgi	47.74	49.62
HORVU5Hr1G087930.1	Barley	cytosol	28.76	48.52
Zm00001d021416_P001	Maize	cytosol	54.74	47.53
TraesCS5D01G362300.1	Wheat	cytosol	57.08	44.74
HORVU5Hr1G087970.1	Barley	cytosol, plastid	34.01	44.64
TraesCS5B01G357200.1	Wheat	cytosol	56.79	44.41
Os09t0553900-01	Rice	plasma membrane	56.93	44.17
VIT_18s0122g00830.t01	Wine grape	nucleus	55.18	44.0
TraesCS5A01G355000.1	Wheat	cytosol	56.06	43.94
Bra034930.1-P	Field mustard	cytosol	38.25	43.38
KRH60483	Soybean	nucleus	53.87	43.16
HORVU5Hr1G079950.1	Barley	cytosol	55.33	42.97
KRH09253	Soybean	cytosol	52.12	41.46
CDY35798	Canola	cytosol	48.91	41.41
KRH38751	Soybean	cytosol	51.53	41.14
KRH41783	Soybean	nucleus	52.26	40.77
CDX80727	Canola	cytosol	47.88	40.69
Bra034929.1-P	Field mustard	cytosol	48.91	40.31
Solyc10g006330.2.1	Tomato	cytosol, nucleus	51.53	39.98
PGSC0003DMT400037294	Potato	cytosol	51.53	39.84
AT1G42550.1	Thale cress	nucleus	47.88	38.91
OQU89905	Sorghum	plastid	54.16	38.21
GSMUA_Achr1P05230_001	Banana	nucleus	28.91	18.08

Protein Annotations

EnsemblPlants:GSMUA_Achr11P07410_001	EnsemblPlants:GSMUA_Achr11T07410_001	EnsemblPlantsGene:GSMUA_Achr11G07410_001	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0009902	GO:GO:0009987	GO:GO:0016043	InterPro:IPR019448	InterPro:NT-C2	InterPro:PMI1
PANTHER:PTHR33414	PANTHER:PTHR33414:SF2	PFAM:PF10358	PFscan:PS51840	SEG:seg	UniParc:UPI0002953D35
UniProt:M0RQ71	MapMan:20.5.5	:	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G07410_001]

Coordinates

chr11:+:5799160..5801512

Molecular Weight (calculated)

73749.2 Da

IEP (calculated)

5.111

GRAVY (calculated)

-0.252

Length

685 amino acids

Sequence
(BLAST)

001: MQRLGCLFSV EVVAIQGLPA SMNGLRLSVV VRKKETKEGA LQTMPARVLQ GSADFEETLF IRCHVYCSGG AGTGKPLKFE SRPFLISIVA IDAPELDFGK
101: NSVDLSPLVK ESMEKSLEGA RVRQWDSSFP LSGKAKGGEL VLKLSFQIME DGGVGLYKKA EAGGGSSSST TAKARESSFS SVFKKSKSSF SVTSPKITRS
201: KPSLTPTKEA SSVDLKEIDD FSLDDPAPPP SSSPPPVQKP EPELKDDLDL PEFEATLAPS EVVKEVVHDS AHLSRLTELD AIAQQIKALE SLMVGDVLNP
301: TKAAQEDETP RLDAEEDAVT REFLQMLELE DKTPPIFDIG DHLSAAETGV AEGRDGDKGI YISDLGKGLG SVVQTRDGGY LSATNPFNVE VARKETPKLA
401: MQISRPFILG EQRLTSGFEV FQRLAAIGPD ELGAKLQSLT SMDELMGKTA EQIAFEGMAA AIISGRNKEG ASSSAARTKI EAMAVEALKI QAGMAEEEAL
501: FDVSPLAAKA ADKHPLYSAI PPEDWEAACA AANSVTLLVV IQLRDPLRRY ETVGAPLIAM IQAARAEGGG KEEEAKFKVA SLHVGGLKLR PGGRRGVWDG
601: EKQRLTAMQW LVAYGLGKAG KKKAGQGKGG QDALWSLSSR IMADMWLKPM RNPDYERVNP MPLSYYGTIT TIACINNIWE IFNNN

Best Arabidopsis Sequence Match ( AT1G42550.1 )
(BLAST)

001: MAGEYSGSRS SNTQLLAELE ALSENLYQKP QVSVGNRRTN SLALPRSSVP SLVTSADEVS TARAEDLTVS KPRARRLSLS PWRSRPKLEV EEEENVTQSN
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH

Arabidopsis Description

PMI1Protein PLASTID MOVEMENT IMPAIRED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.