Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P11690_001 | Banana | endoplasmic reticulum, golgi | 57.78 | 59.18 |
| GSMUA_Achr11P... | Banana | extracellular | 51.26 | 50.51 |
| Bra034930.1-P | Field mustard | cytosol | 33.33 | 37.25 |
| VIT_18s0122g00830.t01 | Wine grape | nucleus | 46.67 | 36.67 |
| KRH60483 | Soybean | nucleus | 45.63 | 36.02 |
| KRH09253 | Soybean | cytosol | 45.63 | 35.77 |
| CDY35798 | Canola | cytosol | 42.22 | 35.23 |
| Solyc10g006330.2.1 | Tomato | cytosol, nucleus | 45.93 | 35.11 |
| KRH38751 | Soybean | cytosol | 44.59 | 35.08 |
| KRH41783 | Soybean | nucleus | 45.48 | 34.97 |
| PGSC0003DMT400037294 | Potato | cytosol | 45.48 | 34.65 |
| CDX80727 | Canola | cytosol | 41.19 | 34.49 |
| Bra034929.1-P | Field mustard | cytosol | 42.37 | 34.42 |
| AT1G42550.1 | Thale cress | nucleus | 42.81 | 34.28 |
| TraesCS1D01G204800.1 | Wheat | cytosol | 39.11 | 32.63 |
| HORVU1Hr1G052010.1 | Barley | cytosol | 39.11 | 32.51 |
| TraesCS1B01G215700.1 | Wheat | cytosol | 38.81 | 32.35 |
| TraesCS1A01G201400.1 | Wheat | cytosol | 38.81 | 32.23 |
| Os10t0539700-01 | Rice | cytosol, plasma membrane | 39.7 | 32.21 |
| Zm00001d029761_P001 | Maize | cytosol | 38.67 | 31.07 |
| EER94579 | Sorghum | cytosol, nucleus, plastid | 38.67 | 30.31 |
| GSMUA_Achr1P05230_001 | Banana | nucleus | 26.07 | 16.07 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P02110_001 | EnsemblPlants:GSMUA_Achr1T02110_001 | EnsemblPlantsGene:GSMUA_Achr1G02110_001 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0009902 | GO:GO:0009987 | GO:GO:0016043 | InterPro:IPR019448 | InterPro:NT-C2 | InterPro:PMI1 |
| PANTHER:PTHR33414 | PANTHER:PTHR33414:SF2 | PFAM:PF10358 | PFscan:PS51840 | SEG:seg | UniParc:UPI000294A3B3 |
| UniProt:M0RWB9 | MapMan:20.5.5 | : | : | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G02110_001]
Coordinates
chr1:-:1724463..1728638
Molecular Weight (calculated)
74738.6 Da
IEP (calculated)
5.204
GRAVY (calculated)
-0.335
Length
675 amino acids
Sequence
(BLAST)
(BLAST)
001: MHRLVCLFSV EVIAIQHLPT SMDGLRLSVA VRKKETKDGA VQTMPSRVLE GCADFEETLF VRCHLYCRGG AAAGKPLEFE ARPFLISTVA VDVPQIDLGR
101: SIVDLSLLVK ESIQKNLEGQ RIRQWDLAFP LSGKAKGGEM ILKLAFQIME DGGIGIYNQA EKIRSNNEKD SNFSVPRKQS KSSFSVALRG GQSTIPSNTS
201: SVRKVEETKD FGLDHGPGLR PSIPPVVQKA KPYPREEDPN LPDFEVIDKG IEIHEEKVVH DRAQWSRLKE LHVIAKEIKA LELIMIDGGA DLVKTTQEDK
301: FQRLDTEEEI VTREFVRMLE FEDGKEPKYD GLDLVTSSDH GAKEVVKDEE EKILVPDLGK SLGSVVQTRD GGYLVSMNPF NVQVTRKETP KLAMQISREV
401: IVEDEKQASE LQLFQRLAAM GSEEMVSRLL SQTAMDELLG KTAEQIAFEG VASAIISGRN KEGASSSAAR MEAMAVEALK VQADMADEEA EVAPSEEVSP
501: VIGNDDAGNP LDSAISLEDW LITCSTSRHM TMLVVIQLRD PLRRNEAVGA PMIAVVQAAA SDDDQPDEER RFKLVSLHVG GVKLSSNRKR STWDGEKQRL
601: TAMQWLVENG LGKAGRRAKQ MQAKRGHDLI WSITSRLTKG AWLKPVRNPN VIFLSDSSLS TVLVAFPIDR DDLSY
101: SIVDLSLLVK ESIQKNLEGQ RIRQWDLAFP LSGKAKGGEM ILKLAFQIME DGGIGIYNQA EKIRSNNEKD SNFSVPRKQS KSSFSVALRG GQSTIPSNTS
201: SVRKVEETKD FGLDHGPGLR PSIPPVVQKA KPYPREEDPN LPDFEVIDKG IEIHEEKVVH DRAQWSRLKE LHVIAKEIKA LELIMIDGGA DLVKTTQEDK
301: FQRLDTEEEI VTREFVRMLE FEDGKEPKYD GLDLVTSSDH GAKEVVKDEE EKILVPDLGK SLGSVVQTRD GGYLVSMNPF NVQVTRKETP KLAMQISREV
401: IVEDEKQASE LQLFQRLAAM GSEEMVSRLL SQTAMDELLG KTAEQIAFEG VASAIISGRN KEGASSSAAR MEAMAVEALK VQADMADEEA EVAPSEEVSP
501: VIGNDDAGNP LDSAISLEDW LITCSTSRHM TMLVVIQLRD PLRRNEAVGA PMIAVVQAAA SDDDQPDEER RFKLVSLHVG GVKLSSNRKR STWDGEKQRL
601: TAMQWLVENG LGKAGRRAKQ MQAKRGHDLI WSITSRLTKG AWLKPVRNPN VIFLSDSSLS TVLVAFPIDR DDLSY
001: MAGEYSGSRS SNTQLLAELE ALSENLYQKP QVSVGNRRTN SLALPRSSVP SLVTSADEVS TARAEDLTVS KPRARRLSLS PWRSRPKLEV EEEENVTQSN
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
Arabidopsis Description
PMI1Protein PLASTID MOVEMENT IMPAIRED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.