Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029761_P001 | Maize | cytosol | 79.67 | 81.67 |
| Os10t0539700-01 | Rice | cytosol, plasma membrane | 67.02 | 69.35 |
| TraesCS1D01G204800.1 | Wheat | cytosol | 64.81 | 68.97 |
| TraesCS1A01G201400.1 | Wheat | cytosol | 64.0 | 67.77 |
| HORVU1Hr1G052010.1 | Barley | cytosol | 63.88 | 67.73 |
| TraesCS1B01G215700.1 | Wheat | cytosol | 63.65 | 67.65 |
| GSMUA_Achr5P11690_001 | Banana | endoplasmic reticulum, golgi | 29.73 | 38.85 |
| Bra034930.1-P | Field mustard | cytosol | 27.18 | 38.74 |
| GSMUA_Achr1P02110_001 | Banana | extracellular | 30.31 | 38.67 |
| KRH60483 | Soybean | nucleus | 37.86 | 38.13 |
| VIT_18s0122g00830.t01 | Wine grape | nucleus | 37.63 | 37.72 |
| CDY35798 | Canola | cytosol | 35.19 | 37.45 |
| KRH09253 | Soybean | cytosol | 37.17 | 37.17 |
| CDX80727 | Canola | cytosol | 34.61 | 36.97 |
| KRH41783 | Soybean | nucleus | 37.63 | 36.9 |
| Bra034929.1-P | Field mustard | cytosol | 35.31 | 36.58 |
| KRH38751 | Soybean | cytosol | 36.12 | 36.25 |
| AT1G42550.1 | Thale cress | nucleus | 35.19 | 35.94 |
| Solyc10g006330.2.1 | Tomato | cytosol, nucleus | 36.59 | 35.67 |
| PGSC0003DMT400037294 | Potato | cytosol | 36.24 | 35.21 |
| OQU89905 | Sorghum | plastid | 38.68 | 34.29 |
| OQU87417 | Sorghum | nucleus | 22.88 | 17.01 |
Protein Annotations
| EnsemblPlants:EER94579 | EnsemblPlantsGene:SORBI_3001G313000 | EntrezGene:8058808 | InterPro:IPR019448 | InterPro:NT-C2 | PANTHER:PTHR33414 |
| PANTHER:PTHR33414:SF3 | PFAM:PF10358 | PFscan:PS51840 | ProteinID:EER94579 | ProteinID:EER94579.1 | RefSeq:XP_002467581.1 |
| SEG:seg | UniParc:UPI0001A8303D | UniProt:C5WTL3 | MapMan:20.5.5 | : | : |
Description
hypothetical protein
Coordinates
chr1:-:60002775..60006100
Molecular Weight (calculated)
90866.6 Da
IEP (calculated)
10.244
GRAVY (calculated)
-0.336
Length
861 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSGREGAP AASSAGASLM TDYLDRPNAI HRRAASLAIV RSGGARAAGD DDDGPRVVDG HGREDRRAQS SRRRPSLSLW RSNRATAVDS RTPVPGAGAR
101: GGGKDKGGGS STWRSWRPVR ALSHLGKRRA GCLFSVQVDA ARGVPASMEG FRLAVTVRKA ETSRDAGAVQ TMPCRVRDGA AEFDETLFVR CSLYFTGGAG
201: TGKPLRLQPR RFVVSVVAVE GRGALLGAHT VDVSSLVIES LDKISSEGRR VRWFHKTFAL SSGKAAAAAA GGELQLKLGF QLMGDAGLSL YTQAGERDEK
301: YSPASSSRAR AHNRNSFSVS TTPKLLSSSD ASISPSMRAY KQLVDRLRVD ENGDPDHHHP AVRSLIPRKP GDDELSASTS DAGDVFSLPE YEVVEKGVET
401: VKEVVHYQAQ RDVLRELDSI ADQIEAIEAL MTNGGKKSPK AADQQRLDAD EEMVTVEFLR KLEVDGVGDK KKLKLPVTPR SGSPSPRKAA TTTPPVVPDL
501: GRGIGPAVQT RDGGFLVSMN PFDLPLASRD GPPKLAMQVS RPFVLPGAMA ATTGFDVLQK MAAAGGADEV RDRVASLGGM DNITGKTPEQ VGFEGIAAAV
601: IGGRRTEGAS SSAARSVRLV RKLATALSEG RSERVSTGIW TAGDDPETLE EVLAFSLQKL ETMAVDALAV QAEMADEDAP FEVSASAGDT TSVFDSLVPS
701: DEWSESAAGG GSDGRVTLVA AIQVRDPWRR YEAVGAPMVA VVQSARLLGA AGYSGGRFKV RSLHVGGVQM RCPPSGRGGG SASWGAERQK LTAMQWMLAH
801: GPAARAGKRA TTPTTPTAAQ GRARVVQRPD VVWSLSSRVL AGMWLKTVRN PDVRIGKGGG T
101: GGGKDKGGGS STWRSWRPVR ALSHLGKRRA GCLFSVQVDA ARGVPASMEG FRLAVTVRKA ETSRDAGAVQ TMPCRVRDGA AEFDETLFVR CSLYFTGGAG
201: TGKPLRLQPR RFVVSVVAVE GRGALLGAHT VDVSSLVIES LDKISSEGRR VRWFHKTFAL SSGKAAAAAA GGELQLKLGF QLMGDAGLSL YTQAGERDEK
301: YSPASSSRAR AHNRNSFSVS TTPKLLSSSD ASISPSMRAY KQLVDRLRVD ENGDPDHHHP AVRSLIPRKP GDDELSASTS DAGDVFSLPE YEVVEKGVET
401: VKEVVHYQAQ RDVLRELDSI ADQIEAIEAL MTNGGKKSPK AADQQRLDAD EEMVTVEFLR KLEVDGVGDK KKLKLPVTPR SGSPSPRKAA TTTPPVVPDL
501: GRGIGPAVQT RDGGFLVSMN PFDLPLASRD GPPKLAMQVS RPFVLPGAMA ATTGFDVLQK MAAAGGADEV RDRVASLGGM DNITGKTPEQ VGFEGIAAAV
601: IGGRRTEGAS SSAARSVRLV RKLATALSEG RSERVSTGIW TAGDDPETLE EVLAFSLQKL ETMAVDALAV QAEMADEDAP FEVSASAGDT TSVFDSLVPS
701: DEWSESAAGG GSDGRVTLVA AIQVRDPWRR YEAVGAPMVA VVQSARLLGA AGYSGGRFKV RSLHVGGVQM RCPPSGRGGG SASWGAERQK LTAMQWMLAH
801: GPAARAGKRA TTPTTPTAAQ GRARVVQRPD VVWSLSSRVL AGMWLKTVRN PDVRIGKGGG T
001: MAGEYSGSRS SNTQLLAELE ALSENLYQKP QVSVGNRRTN SLALPRSSVP SLVTSADEVS TARAEDLTVS KPRARRLSLS PWRSRPKLEV EEEENVTQSN
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
Arabidopsis Description
PMI1Protein PLASTID MOVEMENT IMPAIRED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.