Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011716_P001 | Maize | nucleus | 88.86 | 89.63 |
| Os01t0714100-01 | Rice | cytosol | 27.12 | 79.49 |
| TraesCS3D01G248600.1 | Wheat | nucleus | 71.16 | 72.6 |
| HORVU3Hr1G067440.1 | Barley | plastid | 61.31 | 71.36 |
| TraesCS3B01G277400.1 | Wheat | cytosol | 69.17 | 66.14 |
| VIT_11s0016g01610.t01 | Wine grape | cytosol | 12.87 | 59.13 |
| GSMUA_Achr1P05230_001 | Banana | nucleus | 47.24 | 49.95 |
| Solyc05g032750.2.1 | Tomato | nucleus | 40.16 | 42.12 |
| VIT_11s0016g01690.t01 | Wine grape | cytosol | 42.4 | 41.75 |
| Solyc07g041180.2.1 | Tomato | nucleus | 40.24 | 41.24 |
| PGSC0003DMT400028119 | Potato | cytosol | 40.59 | 41.05 |
| PGSC0003DMT400053992 | Potato | nucleus | 39.9 | 40.7 |
| CDY16548 | Canola | nucleus | 35.49 | 39.86 |
| KRH12468 | Soybean | cytosol | 38.17 | 39.53 |
| CDY45081 | Canola | nucleus | 35.66 | 38.93 |
| Bra020112.1-P | Field mustard | nucleus | 35.84 | 38.86 |
| CDX92449 | Canola | nucleus | 32.47 | 38.37 |
| KRH37453 | Soybean | cytosol | 40.16 | 38.02 |
| KRH02657 | Soybean | nucleus | 5.96 | 37.91 |
| AT5G20610.1 | Thale cress | nucleus | 36.87 | 36.68 |
| KRH19252 | Soybean | nucleus | 24.52 | 36.32 |
| Bra002315.1-P | Field mustard | nucleus | 35.75 | 34.97 |
| EER94579 | Sorghum | cytosol, nucleus, plastid | 17.01 | 22.88 |
| OQU89905 | Sorghum | plastid | 17.27 | 20.6 |
Protein Annotations
| EnsemblPlants:OQU87417 | EnsemblPlantsGene:SORBI_3003G275800 | EntrezGene:8069787 | InterPro:IPR019448 | InterPro:NT-C2 | PANTHER:PTHR33414 |
| PANTHER:PTHR33414:SF1 | PFscan:PS51840 | ProteinID:EES03518.1 | ProteinID:OQU87416.1 | ProteinID:OQU87417 | ProteinID:OQU87417.1 |
| ProteinID:OQU87418.1 | ProteinID:OQU87419.1 | RefSeq:XP_002458398.1 | SEG:seg | UniParc:UPI0001A84CEC | UniProt:C5XI97 |
| MapMan:20.5.6 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:61227844..61234918
Molecular Weight (calculated)
124509.0 Da
IEP (calculated)
4.945
GRAVY (calculated)
-0.472
Length
1158 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSRFPHHHG GGGDHPRGGD AGDAALARDI VTLHKALSLD PSARRRRSLP LPSPSPAATE QPRNKPRLKP SFSSSSSSSR KLLPSTVNSS TASTSSSSSS
0101: TSSFWKKSLT AISHLGRRRL DCAFALHVHS VDGLPAALDG SAVSVQFRRM SVSASTRSVP AALGAAAFEE ALTLRSPVYF SRGAKAVVKY EPRAFAVSVA
0201: ASTLELGKHE VDLTRLLPLS FDDLEDGGDS GFGKWSTSFR LSGPARGARL NVTFSCSLLA GGAAASEQHK AGEVAGLRRG SMARPVSVQA PTPVPARSRD
0301: VRVLHEVLPS LRSARSLPFV GDGAPDARKE EVAALDCTEE GSPEAKHCTS VEVKKGDSVR QDGDWGTVDF NVVEHGVEVA SDDPPRLKHA ETSNAADQNE
0401: DSGFQIDEEG SFKPVLISGD VADLAEDQTV GVKTEVAVSD VAVEKENVED KQDGIVKAAS LPSAALEAED QFGADAELED LECILNELSV AEPEEFESPA
0501: VEDKHSRRLS CTGVTDSYKS ASRKGRSHSM DVSTDSVANE FLDMLGIEHS PFGQPSDSDS ESPRERLWKQ FEKEALASGN AILGLDFDHG IEGPTCEDVV
0601: EDFDLSAMIH EAELELQNGS QPIDTKFRAK SLEDEETEAL MRQFGLNEKS FQSSPPESRS GFGSPINLPP EQPLELPPLA EGLGPFIQTK DGGFLRSMNP
0701: ALFKNAKNNC SLVMQASSPI VLPAEMGSGI MDILHGLASV GIEKLSMQAN KLMPLEDVNG KMMQQIAWEA APALESGERY DALDYHSIDA LVGGGGNAPS
0801: GKKKKGRCAE LSSLGGENAS EYVSLEDLAP LAMEKIEALS IEGLRIQSGM SEEDAPSNIS AKPIGEFSSL QGKCAESTLS LGLEGTAGLQ LLDVKQSGEE
0901: VDGLMGLSIT LDEWMRLDSG VVDEEEQYSD RTSKILAAHH AKSMELVAEN RNGDRKSRRS GRRWGLLGNN FTVALMVQLR DPLRNYEPVG TPMLALIQVE
1001: RVFVPPKPKI YSTVLDKPNS EQDDEEPKTE EVPDKALVTE EKAEELEDPI PQFKVTEVHV AGFKSEPEKT KPWGNQTQQQ SGSRWLLAAG MGKGNKHPLM
1101: KSKAIVKPTK EAAGQAGDTL WSISSRVHGA GTRWGELTGN KNHSRNPNIV LQKDKRFR
0101: TSSFWKKSLT AISHLGRRRL DCAFALHVHS VDGLPAALDG SAVSVQFRRM SVSASTRSVP AALGAAAFEE ALTLRSPVYF SRGAKAVVKY EPRAFAVSVA
0201: ASTLELGKHE VDLTRLLPLS FDDLEDGGDS GFGKWSTSFR LSGPARGARL NVTFSCSLLA GGAAASEQHK AGEVAGLRRG SMARPVSVQA PTPVPARSRD
0301: VRVLHEVLPS LRSARSLPFV GDGAPDARKE EVAALDCTEE GSPEAKHCTS VEVKKGDSVR QDGDWGTVDF NVVEHGVEVA SDDPPRLKHA ETSNAADQNE
0401: DSGFQIDEEG SFKPVLISGD VADLAEDQTV GVKTEVAVSD VAVEKENVED KQDGIVKAAS LPSAALEAED QFGADAELED LECILNELSV AEPEEFESPA
0501: VEDKHSRRLS CTGVTDSYKS ASRKGRSHSM DVSTDSVANE FLDMLGIEHS PFGQPSDSDS ESPRERLWKQ FEKEALASGN AILGLDFDHG IEGPTCEDVV
0601: EDFDLSAMIH EAELELQNGS QPIDTKFRAK SLEDEETEAL MRQFGLNEKS FQSSPPESRS GFGSPINLPP EQPLELPPLA EGLGPFIQTK DGGFLRSMNP
0701: ALFKNAKNNC SLVMQASSPI VLPAEMGSGI MDILHGLASV GIEKLSMQAN KLMPLEDVNG KMMQQIAWEA APALESGERY DALDYHSIDA LVGGGGNAPS
0801: GKKKKGRCAE LSSLGGENAS EYVSLEDLAP LAMEKIEALS IEGLRIQSGM SEEDAPSNIS AKPIGEFSSL QGKCAESTLS LGLEGTAGLQ LLDVKQSGEE
0901: VDGLMGLSIT LDEWMRLDSG VVDEEEQYSD RTSKILAAHH AKSMELVAEN RNGDRKSRRS GRRWGLLGNN FTVALMVQLR DPLRNYEPVG TPMLALIQVE
1001: RVFVPPKPKI YSTVLDKPNS EQDDEEPKTE EVPDKALVTE EKAEELEDPI PQFKVTEVHV AGFKSEPEKT KPWGNQTQQQ SGSRWLLAAG MGKGNKHPLM
1101: KSKAIVKPTK EAAGQAGDTL WSISSRVHGA GTRWGELTGN KNHSRNPNIV LQKDKRFR
0001: MSKVNSEESS SSQKLLKEVE KISEALYVNK NPRGSVAGSN KTPTKPLSRS NLAEPKEKKS FWNWPLRAIN HVRNRRFNCC FSAQVHSIEG LPPIFQDLSL
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
Arabidopsis Description
PMIR1Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:F4K5K6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.