Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH12468 | Soybean | cytosol | 69.99 | 76.57 |
| VIT_11s0016g01610.t01 | Wine grape | cytosol | 12.43 | 60.32 |
| VIT_11s0016g01690.t01 | Wine grape | cytosol | 51.59 | 53.66 |
| Os01t0714100-01 | Rice | cytosol | 16.76 | 51.9 |
| KRH19252 | Soybean | nucleus | 32.46 | 50.77 |
| Solyc05g032750.2.1 | Tomato | nucleus | 45.71 | 50.63 |
| PGSC0003DMT400028119 | Potato | cytosol | 47.26 | 50.48 |
| PGSC0003DMT400053992 | Potato | nucleus | 45.79 | 49.34 |
| CDY45081 | Canola | nucleus | 42.68 | 49.2 |
| Bra020112.1-P | Field mustard | nucleus | 42.85 | 49.06 |
| Solyc07g041180.2.1 | Tomato | nucleus | 45.22 | 48.94 |
| CDY16548 | Canola | nucleus | 41.21 | 48.88 |
| CDX92449 | Canola | nucleus | 38.92 | 48.57 |
| KRH02657 | Soybean | nucleus | 6.95 | 46.7 |
| AT5G20610.1 | Thale cress | nucleus | 43.74 | 45.96 |
| GSMUA_Achr1P05230_001 | Banana | nucleus | 40.72 | 45.48 |
| Bra002315.1-P | Field mustard | nucleus | 41.54 | 42.91 |
| Zm00001d011716_P001 | Maize | nucleus | 37.69 | 40.16 |
| OQU87417 | Sorghum | nucleus | 38.02 | 40.16 |
| Zm00001d043666_P001 | Maize | nucleus | 37.37 | 39.91 |
| TraesCS3D01G248600.1 | Wheat | nucleus | 36.3 | 39.12 |
| HORVU3Hr1G067440.1 | Barley | plastid | 31.81 | 39.1 |
| Zm00001d044668_P001 | Maize | extracellular | 22.65 | 36.59 |
| TraesCS3B01G277400.1 | Wheat | cytosol | 36.22 | 36.58 |
| Zm00001d042647_P001 | Maize | mitochondrion | 5.48 | 35.64 |
| KRH05392 | Soybean | mitochondrion | 31.23 | 35.01 |
| KRH15624 | Soybean | nucleus | 31.23 | 34.98 |
| Zm00001d020517_P001 | Maize | mitochondrion | 11.12 | 28.1 |
| Zm00001d037913_P001 | Maize | plastid | 4.91 | 27.15 |
| KRH60483 | Soybean | nucleus | 18.48 | 26.43 |
| KRH09253 | Soybean | cytosol | 18.56 | 26.36 |
| KRH41783 | Soybean | nucleus | 18.4 | 25.63 |
| KRH38751 | Soybean | cytosol | 17.82 | 25.41 |
Protein Annotations
| EntrezGene:100806958 | MapMan:20.5.6 | Gene3D:3.10.350.10 | EMBL:ACUP02005448 | ncoils:Coil | EnsemblPlantsGene:GLYMA_09G067200 |
| InterPro:IPR018392 | InterPro:IPR019448 | InterPro:IPR036779 | UniProt:K7LC82 | EnsemblPlants:KRH37453 | ProteinID:KRH37453 |
| ProteinID:KRH37453.1 | InterPro:LysM_dom | InterPro:LysM_dom_sf | InterPro:NT-C2 | PFAM:PF01476 | PFAM:PF10358 |
| PFscan:PS51782 | PFscan:PS51840 | PANTHER:PTHR33414 | PANTHER:PTHR33414:SF1 | UniParc:UPI0002957629 | SEG:seg |
Description
hypothetical protein
Coordinates
chr9:+:6651767..6656232
Molecular Weight (calculated)
134612.0 Da
IEP (calculated)
4.860
GRAVY (calculated)
-0.539
Length
1223 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDFFGLQSFG FEYEKMMLSR MEAGKKGGGG SSNQKKLLKD VETMNKALYL DRNSSRSSIP SANSRSKFTG KPQLPDPRSK SKASNDHNGE NAQKDKKSIW
0101: NWRPLRALSH IRNKRFNCSF YLQVHLIEGL PPSFDDAGLA VYWKRRDGVL VTQPAKVVQC VAEFEEKLTY TCSVYGSRSG PHHSAKYEAK HFLLYASLLS
0201: VPEMDLGKHR VDLTRLLPLT LEELEEEKSS GKWTTSFRLM GLAKGATMNV SFGYTVVGDN ASATRDSLPK ALSSRQNSFS LTPTKFDVKP RQFDGSSTMR
0301: RATSLQYSPQ ASDEVKDLHE VLPLTKSALA SSITSYIELD EEKLCSPLDD KTELDSFTEN LGPIKPDAYA SDLGKERLEE HATKDESTCD KPELYVFQEK
0401: LETVKPDGYF LPDFGNKNPE QCHDNEFFVV DKGIELSSNE RVKLEESIIK APDDASMVDT VCTLGISGIQ ISSEDSVKHD FLDEANDSSK DQGVVEEFAS
0501: IKAPEDASTV DTSCTLGISG RQVSSEDSVE HDFLDEANGL DTNELLMQEL ESALNSVSNL ERVALESPKT TEAKSEHKMT KSHSLDDVTA SVATEFLSML
0601: GLDHSPMGLS SESEPESPRE LLLRQFEKEA LNGGFSSLFD FDMNYDSEAA GGYDASASSE QWNFSEGVKS SSFLQDLLEE PPVESQDVRS KQRAQMLEDL
0701: ETEALMRQWG LNENAFHHSP PKDFAGFGSP IHLPPEEPPT LPPLDDGLGP FLQTKDGGFL RTMSPSIFKN SKSCGSLIMQ VSNPVVVPAE MGSGIMEVLQ
0801: CLASVGIEKL SMQAKELMPL EDITGKTMQQ IAWEAMPSLE GAERQCHLRH DPITVPDSAG VQRDLKGMPS KQKSGKFSSR TVANQTGSEF VSVEDLAPLA
0901: MDKIEALSME GLRIQSGMSE EEAPSNIIAQ SIGDISALQG KGVDISGSLG LDGAAGLQLM DVKDGGDGVD GIMSLSLTLD EWMKLDSGEI DDIDNISEHT
1001: SKLLAAHHAN SFDFIRGSSK GEKRRGKSRC GLLGNNFTVA LMVQLRDPMR NYEPVGTPML ALIQVEREFM LPKQRIFNSV SEIRKNYYED DESNIVAKLK
1101: TKDTEKEEKS SEEEGGIPQF RITEVHVAGL KPEPQKKKLW GTSSQQQSGS RWLLANGMGK SNNKLSLMKS KAASKSNAPV TTKGQPGDSL WSISSRIDGA
1201: RGKWKELAAL NPHIRNPNVI LPN
0101: NWRPLRALSH IRNKRFNCSF YLQVHLIEGL PPSFDDAGLA VYWKRRDGVL VTQPAKVVQC VAEFEEKLTY TCSVYGSRSG PHHSAKYEAK HFLLYASLLS
0201: VPEMDLGKHR VDLTRLLPLT LEELEEEKSS GKWTTSFRLM GLAKGATMNV SFGYTVVGDN ASATRDSLPK ALSSRQNSFS LTPTKFDVKP RQFDGSSTMR
0301: RATSLQYSPQ ASDEVKDLHE VLPLTKSALA SSITSYIELD EEKLCSPLDD KTELDSFTEN LGPIKPDAYA SDLGKERLEE HATKDESTCD KPELYVFQEK
0401: LETVKPDGYF LPDFGNKNPE QCHDNEFFVV DKGIELSSNE RVKLEESIIK APDDASMVDT VCTLGISGIQ ISSEDSVKHD FLDEANDSSK DQGVVEEFAS
0501: IKAPEDASTV DTSCTLGISG RQVSSEDSVE HDFLDEANGL DTNELLMQEL ESALNSVSNL ERVALESPKT TEAKSEHKMT KSHSLDDVTA SVATEFLSML
0601: GLDHSPMGLS SESEPESPRE LLLRQFEKEA LNGGFSSLFD FDMNYDSEAA GGYDASASSE QWNFSEGVKS SSFLQDLLEE PPVESQDVRS KQRAQMLEDL
0701: ETEALMRQWG LNENAFHHSP PKDFAGFGSP IHLPPEEPPT LPPLDDGLGP FLQTKDGGFL RTMSPSIFKN SKSCGSLIMQ VSNPVVVPAE MGSGIMEVLQ
0801: CLASVGIEKL SMQAKELMPL EDITGKTMQQ IAWEAMPSLE GAERQCHLRH DPITVPDSAG VQRDLKGMPS KQKSGKFSSR TVANQTGSEF VSVEDLAPLA
0901: MDKIEALSME GLRIQSGMSE EEAPSNIIAQ SIGDISALQG KGVDISGSLG LDGAAGLQLM DVKDGGDGVD GIMSLSLTLD EWMKLDSGEI DDIDNISEHT
1001: SKLLAAHHAN SFDFIRGSSK GEKRRGKSRC GLLGNNFTVA LMVQLRDPMR NYEPVGTPML ALIQVEREFM LPKQRIFNSV SEIRKNYYED DESNIVAKLK
1101: TKDTEKEEKS SEEEGGIPQF RITEVHVAGL KPEPQKKKLW GTSSQQQSGS RWLLANGMGK SNNKLSLMKS KAASKSNAPV TTKGQPGDSL WSISSRIDGA
1201: RGKWKELAAL NPHIRNPNVI LPN
0001: MSKVNSEESS SSQKLLKEVE KISEALYVNK NPRGSVAGSN KTPTKPLSRS NLAEPKEKKS FWNWPLRAIN HVRNRRFNCC FSAQVHSIEG LPPIFQDLSL
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
Arabidopsis Description
PMIR1Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:F4K5K6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.