Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH37453 | Soybean | cytosol | 76.57 | 69.99 |
| VIT_11s0016g01610.t01 | Wine grape | cytosol | 13.86 | 61.51 |
| Os01t0714100-01 | Rice | cytosol | 18.34 | 51.9 |
| KRH02657 | Soybean | nucleus | 8.14 | 50.0 |
| PGSC0003DMT400028119 | Potato | cytosol | 50.09 | 48.91 |
| Solyc05g032750.2.1 | Tomato | nucleus | 47.85 | 48.46 |
| PGSC0003DMT400053992 | Potato | nucleus | 48.48 | 47.75 |
| VIT_11s0016g01690.t01 | Wine grape | cytosol | 50.09 | 47.62 |
| Solyc07g041180.2.1 | Tomato | nucleus | 47.41 | 46.9 |
| CDY45081 | Canola | nucleus | 44.01 | 46.37 |
| CDY16548 | Canola | nucleus | 42.67 | 46.27 |
| Bra020112.1-P | Field mustard | nucleus | 44.01 | 46.07 |
| CDX92449 | Canola | nucleus | 39.27 | 44.8 |
| KRH19252 | Soybean | nucleus | 31.22 | 44.63 |
| GSMUA_Achr1P05230_001 | Banana | nucleus | 42.22 | 43.1 |
| AT5G20610.1 | Thale cress | nucleus | 44.28 | 42.53 |
| Bra002315.1-P | Field mustard | nucleus | 42.49 | 40.12 |
| Zm00001d043666_P001 | Maize | nucleus | 39.27 | 38.34 |
| Zm00001d011716_P001 | Maize | nucleus | 39.36 | 38.33 |
| OQU87417 | Sorghum | nucleus | 39.53 | 38.17 |
| HORVU3Hr1G067440.1 | Barley | plastid | 33.81 | 37.99 |
| TraesCS3D01G248600.1 | Wheat | nucleus | 38.55 | 37.97 |
| Zm00001d042647_P001 | Maize | mitochondrion | 5.9 | 35.11 |
| TraesCS3B01G277400.1 | Wheat | cytosol | 37.92 | 35.01 |
| Zm00001d044668_P001 | Maize | extracellular | 23.17 | 34.21 |
| KRH15624 | Soybean | nucleus | 32.56 | 33.33 |
| KRH05392 | Soybean | mitochondrion | 32.29 | 33.09 |
| Zm00001d037913_P001 | Maize | plastid | 5.46 | 27.6 |
| KRH60483 | Soybean | nucleus | 18.96 | 24.8 |
| KRH09253 | Soybean | cytosol | 18.52 | 24.04 |
| KRH41783 | Soybean | nucleus | 18.87 | 24.03 |
| KRH38751 | Soybean | cytosol | 17.98 | 23.43 |
| Zm00001d020517_P001 | Maize | mitochondrion | 10.11 | 23.35 |
Protein Annotations
| EMBL:ACUP02009319 | EnsemblPlants:KRH12468 | EnsemblPlantsGene:GLYMA_15G173100 | Gene3D:3.10.350.10 | InterPro:IPR018392 | InterPro:IPR019448 |
| InterPro:IPR036779 | InterPro:LysM_dom | InterPro:LysM_dom_sf | InterPro:NT-C2 | PANTHER:PTHR33414 | PANTHER:PTHR33414:SF1 |
| PFAM:PF01476 | PFAM:PF10358 | PFscan:PS51840 | ProteinID:KRH12468 | ProteinID:KRH12468.1 | SEG:seg |
| UniParc:UPI0006ED93AE | UniProt:A0A0R0GDN0 | MapMan:20.5.6 | : | : | : |
Description
hypothetical protein
Coordinates
chr15:+:15871521..15875258
Molecular Weight (calculated)
122749.0 Da
IEP (calculated)
4.823
GRAVY (calculated)
-0.571
Length
1118 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEAGKKGGGG SSNQKKLLKD VETMNKALYL DRTSSRSSIP SANSRSKFTG KPQLPDPKSK SKASGDNNSE NVQKDKKSIW NWRPLRALSH IRNKRFNCSF
0101: YLQVHLIEGL PPSFDDASLA VYWKRRDGVL VTQPAKVVQR VAEFEEKLTY TCSVYGSRSG PHHSAKYEAK HFLLYASLLS VPEMDLGKHR VDLTRLLPLT
0201: LEELEEEKSS GKWTTSFRLT GVAKGAAMNV SFGYTVVGDN ASATRDSLPK ALTSRQHSFA PTPTKLDVKP RQFDGSSKMR RATSLQYSSQ AADEVKDLHE
0301: VLPLTKSALA SSIDVLYTKL DEEKACSPLD DEAELDSFNL GPIKPDAYAS DLGKERLEEH ATKDENTCPV DDKPEPYVFQ EKLETVKPDG YSLPDFENEN
0401: PEHCLDNDFF VVDKGIELSS NESVKLEESI IKAPDDASTV DSASTLGISG IQISSEDSVK HDFLDDANDS SKDQAVVEEF ASIKAPEDAS TVDASCTLGI
0501: SASPSTPREL LLRQFEKEAL NGGFSSLFDF DMNYDNEADG GYDASAASEQ WNFSEGVKSS SFLQDDLQEE HPVESQDVRS KQRAQMLEDL ETEALMREWG
0601: LNEKAFHHSP PKDFAGFGSP IHLPPEEPPT LPPLDDGLGP FLQTKDGGFL RSMNPSIFKN SKSGGSLIMQ VSNPVVVPAE MGSGIMEVLQ CLASVGIEKL
0701: SMQAKELMPL EDITGKTMQQ IAWEAMPVLE GAERQCHLQH DPIAWPDSAY VQRDLKGMPS KQKSGKFSSR TVANQTGSEF VSVEDLAPLA MDKIEALSME
0801: GLRIQSGMSE EEAPSNIIAQ SIGDISALQG KGVDVSGSLG LDGAAGLQLM DVKDSDDGGD GVDGIMSLSL TLDEWMKLDS GEIDDIDNIS EHTSKLLAAH
0901: HANSFDFIRG SSKGEKRRGK SRRCGLLGNN FTVALMVQLR DPLRNYEPVG TPMLALIQVE REFMLPKQRI FDSVSEIRKN YDEDDESEIV AKVEMKDTEK
1001: EEKSSEEDEG IPQFRITEVH VAGLKPEPQK KKLWGTSSQQ QSGSRWLLAN GMGKSNNKLS LMKSKAASKS NAPVTTKGQP GGDSLWSISS RIDGARGKWK
1101: ELAALNPHIR NPNVIIPN
0101: YLQVHLIEGL PPSFDDASLA VYWKRRDGVL VTQPAKVVQR VAEFEEKLTY TCSVYGSRSG PHHSAKYEAK HFLLYASLLS VPEMDLGKHR VDLTRLLPLT
0201: LEELEEEKSS GKWTTSFRLT GVAKGAAMNV SFGYTVVGDN ASATRDSLPK ALTSRQHSFA PTPTKLDVKP RQFDGSSKMR RATSLQYSSQ AADEVKDLHE
0301: VLPLTKSALA SSIDVLYTKL DEEKACSPLD DEAELDSFNL GPIKPDAYAS DLGKERLEEH ATKDENTCPV DDKPEPYVFQ EKLETVKPDG YSLPDFENEN
0401: PEHCLDNDFF VVDKGIELSS NESVKLEESI IKAPDDASTV DSASTLGISG IQISSEDSVK HDFLDDANDS SKDQAVVEEF ASIKAPEDAS TVDASCTLGI
0501: SASPSTPREL LLRQFEKEAL NGGFSSLFDF DMNYDNEADG GYDASAASEQ WNFSEGVKSS SFLQDDLQEE HPVESQDVRS KQRAQMLEDL ETEALMREWG
0601: LNEKAFHHSP PKDFAGFGSP IHLPPEEPPT LPPLDDGLGP FLQTKDGGFL RSMNPSIFKN SKSGGSLIMQ VSNPVVVPAE MGSGIMEVLQ CLASVGIEKL
0701: SMQAKELMPL EDITGKTMQQ IAWEAMPVLE GAERQCHLQH DPIAWPDSAY VQRDLKGMPS KQKSGKFSSR TVANQTGSEF VSVEDLAPLA MDKIEALSME
0801: GLRIQSGMSE EEAPSNIIAQ SIGDISALQG KGVDVSGSLG LDGAAGLQLM DVKDSDDGGD GVDGIMSLSL TLDEWMKLDS GEIDDIDNIS EHTSKLLAAH
0901: HANSFDFIRG SSKGEKRRGK SRRCGLLGNN FTVALMVQLR DPLRNYEPVG TPMLALIQVE REFMLPKQRI FDSVSEIRKN YDEDDESEIV AKVEMKDTEK
1001: EEKSSEEDEG IPQFRITEVH VAGLKPEPQK KKLWGTSSQQ QSGSRWLLAN GMGKSNNKLS LMKSKAASKS NAPVTTKGQP GGDSLWSISS RIDGARGKWK
1101: ELAALNPHIR NPNVIIPN
0001: MSKVNSEESS SSQKLLKEVE KISEALYVNK NPRGSVAGSN KTPTKPLSRS NLAEPKEKKS FWNWPLRAIN HVRNRRFNCC FSAQVHSIEG LPPIFQDLSL
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
Arabidopsis Description
PMIR1Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:F4K5K6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.