Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92449 | Canola | nucleus | 80.6 | 84.8 |
| Bra002315.1-P | Field mustard | nucleus | 82.64 | 71.96 |
| CDY45081 | Canola | nucleus | 71.19 | 69.18 |
| AT5G20610.1 | Thale cress | nucleus | 71.19 | 63.06 |
| VIT_11s0016g01610.t01 | Wine grape | cytosol | 14.26 | 58.33 |
| Os01t0714100-01 | Rice | cytosol | 18.62 | 48.61 |
| VIT_11s0016g01690.t01 | Wine grape | cytosol | 51.31 | 44.98 |
| KRH12468 | Soybean | cytosol | 46.27 | 42.67 |
| Solyc05g032750.2.1 | Tomato | nucleus | 45.59 | 42.57 |
| PGSC0003DMT400053992 | Potato | nucleus | 46.36 | 42.11 |
| Solyc07g041180.2.1 | Tomato | nucleus | 46.07 | 42.04 |
| PGSC0003DMT400028119 | Potato | cytosol | 46.46 | 41.83 |
| KRH37453 | Soybean | cytosol | 48.88 | 41.21 |
| GSMUA_Achr1P05230_001 | Banana | nucleus | 42.87 | 40.37 |
| KRH19252 | Soybean | nucleus | 30.46 | 40.15 |
| HORVU3Hr1G067440.1 | Barley | plastid | 34.92 | 36.18 |
| TraesCS3D01G248600.1 | Wheat | nucleus | 39.67 | 36.04 |
| Zm00001d042647_P001 | Maize | mitochondrion | 6.5 | 35.64 |
| Zm00001d043666_P001 | Maize | nucleus | 39.57 | 35.63 |
| OQU87417 | Sorghum | nucleus | 39.86 | 35.49 |
| Zm00001d011716_P001 | Maize | nucleus | 39.38 | 35.37 |
| CDY52626 | Canola | nucleus | 29.68 | 34.85 |
| CDX88218 | Canola | nucleus | 29.58 | 34.62 |
| TraesCS3B01G277400.1 | Wheat | cytosol | 38.51 | 32.78 |
| Zm00001d044668_P001 | Maize | extracellular | 23.76 | 32.36 |
| KRH02657 | Soybean | nucleus | 5.53 | 31.32 |
| Zm00001d020517_P001 | Maize | mitochondrion | 12.32 | 26.24 |
| Zm00001d037913_P001 | Maize | plastid | 5.53 | 25.79 |
| CDY35798 | Canola | cytosol | 17.56 | 22.37 |
| CDX80727 | Canola | cytosol | 17.17 | 21.96 |
Protein Annotations
| EnsemblPlants:CDY16548 | EnsemblPlantsGene:GSBRNA2T00094330001 | InterPro:IPR019448 | InterPro:NT-C2 | ncoils:Coil | PANTHER:PTHR33414 |
| PANTHER:PTHR33414:SF1 | PFAM:PF10358 | PFscan:PS51840 | ProteinID:CDY16548 | ProteinID:CDY16548.1 | SEG:seg |
| UniParc:UPI0004EF0ED5 | UniProt:A0A078FVV4 | MapMan:20.5.6 | : | : | : |
Description
BnaC09g37250DBnaC09g37250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FVV4]
Coordinates
chrLK032065:+:80956..85983
Molecular Weight (calculated)
113472.0 Da
IEP (calculated)
4.542
GRAVY (calculated)
-0.606
Length
1031 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSKANCEESS SSRKLLKEVE TLNESLYVNK NPRRPVVGPN NTSTKPLART NLTEPQKEKK SIWNWPLRAL SHVRNRRFNC CFSAQIHSID NLPPTFQDLY
0101: LTVHWKRRDE SLTTRPAKVL NGRAEFKDKM THTCSVYGSR SGQHHSAKYE AKHFLLYAAL VGSPDVDLGK HRMDLTSLLP LTLEELQDEK SSGKWSTTFQ
0201: LTGKASGATL SVSFGYTVVG DTRSASNAKQ GSSNAALTRA ISGKSKSRPL SKNVVEIKDL HEVVPVAAQS DLVSSVNALY KKFDEEKVDA AAAESQFESD
0301: VVIKHIEPDE SNEDSNAHQV EEQIIMEDLE SALKNVEMLE ATASEEEEDQ ENHGRSTPNK EAASIDVADS VAKESLLSEE ESNVSPKEEE SIVSGDDEDV
0401: MNGGRDVKEI IMKDLESALE SVEMLEATAS EDEEDHGGSS TPNKEEAAST SIDVADSVAN EFLDMLGIEH SPFGLTSESE PESPRERLLR EFEMETLADS
0501: SLFDFGIESD VDPQTEGDEN YESDFDLASL VHDIEEEYQI ETQARVSSNP RAKMLEDLET ESLMRQWGMN ENTFQNSPPH NAFPQADFPV NEAFDLPPLG
0601: DGLGPVVQTK NGGFVRSMNP LLFRNSKAGG SLIMQVSCPV VVPAEMGSGI MEILQRLATA GIEKLSMQAN KVMPLDDITG KTMEEVFCET SPAVDGGHRD
0701: HIPPQRDTAA KPKKFGSSTC NNNLSSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GEISAFQGLE GAAGLQLLNI KDDGDGDDDD
0801: GLMSLSLTLD EWMKLDSGDI GDEEEINEKT SKILAAHHAN PLNFIRKGEK RRGKKGRKCG LLGNNFTVAL MVQLRDPLRN YEPVGAPMLS LIQVERLFVP
0901: PKPIIYSTVS ELRRTDEEGE ETEAVKEEKT MLEEQGIPQY KISEVHLTGM KSETDKKPWG VTTQNQQVQS GSRWLMANGM GKGNNTKVPL MKPKAGDKLW
1001: SVSGSGSKWK ELGKMGKLSA HKRNPNVIMP K
0101: LTVHWKRRDE SLTTRPAKVL NGRAEFKDKM THTCSVYGSR SGQHHSAKYE AKHFLLYAAL VGSPDVDLGK HRMDLTSLLP LTLEELQDEK SSGKWSTTFQ
0201: LTGKASGATL SVSFGYTVVG DTRSASNAKQ GSSNAALTRA ISGKSKSRPL SKNVVEIKDL HEVVPVAAQS DLVSSVNALY KKFDEEKVDA AAAESQFESD
0301: VVIKHIEPDE SNEDSNAHQV EEQIIMEDLE SALKNVEMLE ATASEEEEDQ ENHGRSTPNK EAASIDVADS VAKESLLSEE ESNVSPKEEE SIVSGDDEDV
0401: MNGGRDVKEI IMKDLESALE SVEMLEATAS EDEEDHGGSS TPNKEEAAST SIDVADSVAN EFLDMLGIEH SPFGLTSESE PESPRERLLR EFEMETLADS
0501: SLFDFGIESD VDPQTEGDEN YESDFDLASL VHDIEEEYQI ETQARVSSNP RAKMLEDLET ESLMRQWGMN ENTFQNSPPH NAFPQADFPV NEAFDLPPLG
0601: DGLGPVVQTK NGGFVRSMNP LLFRNSKAGG SLIMQVSCPV VVPAEMGSGI MEILQRLATA GIEKLSMQAN KVMPLDDITG KTMEEVFCET SPAVDGGHRD
0701: HIPPQRDTAA KPKKFGSSTC NNNLSSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GEISAFQGLE GAAGLQLLNI KDDGDGDDDD
0801: GLMSLSLTLD EWMKLDSGDI GDEEEINEKT SKILAAHHAN PLNFIRKGEK RRGKKGRKCG LLGNNFTVAL MVQLRDPLRN YEPVGAPMLS LIQVERLFVP
0901: PKPIIYSTVS ELRRTDEEGE ETEAVKEEKT MLEEQGIPQY KISEVHLTGM KSETDKKPWG VTTQNQQVQS GSRWLMANGM GKGNNTKVPL MKPKAGDKLW
1001: SVSGSGSKWK ELGKMGKLSA HKRNPNVIMP K
0001: MSKVNSEESS SSQKLLKEVE KISEALYVNK NPRGSVAGSN KTPTKPLSRS NLAEPKEKKS FWNWPLRAIN HVRNRRFNCC FSAQVHSIEG LPPIFQDLSL
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
Arabidopsis Description
PMIR1Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:F4K5K6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.