Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45081 | Canola | nucleus | 65.81 | 72.2 |
| Bra020112.1-P | Field mustard | nucleus | 65.98 | 71.91 |
| CDY16548 | Canola | nucleus | 63.06 | 71.19 |
| CDX92449 | Canola | nucleus | 58.08 | 68.98 |
| Bra002315.1-P | Field mustard | nucleus | 68.3 | 67.15 |
| VIT_11s0016g01610.t01 | Wine grape | cytosol | 13.14 | 60.71 |
| Os01t0714100-01 | Rice | cytosol | 16.58 | 48.86 |
| VIT_11s0016g01690.t01 | Wine grape | cytosol | 48.8 | 48.3 |
| Solyc05g032750.2.1 | Tomato | nucleus | 44.67 | 47.1 |
| PGSC0003DMT400028119 | Potato | cytosol | 45.27 | 46.03 |
| Solyc07g041180.2.1 | Tomato | nucleus | 43.47 | 44.78 |
| PGSC0003DMT400053992 | Potato | nucleus | 43.56 | 44.67 |
| KRH12468 | Soybean | cytosol | 42.53 | 44.28 |
| KRH37453 | Soybean | cytosol | 45.96 | 43.74 |
| GSMUA_Achr1P05230_001 | Banana | nucleus | 39.78 | 42.28 |
| KRH19252 | Soybean | nucleus | 28.35 | 42.2 |
| KRH02657 | Soybean | nucleus | 5.84 | 37.36 |
| Zm00001d011716_P001 | Maize | nucleus | 36.43 | 36.93 |
| OQU87417 | Sorghum | nucleus | 36.68 | 36.87 |
| TraesCS3D01G248600.1 | Wheat | nucleus | 35.82 | 36.74 |
| HORVU3Hr1G067440.1 | Barley | plastid | 31.36 | 36.68 |
| Zm00001d043666_P001 | Maize | nucleus | 35.82 | 36.42 |
| Zm00001d042647_P001 | Maize | mitochondrion | 5.67 | 35.11 |
| TraesCS3B01G277400.1 | Wheat | cytosol | 35.74 | 34.35 |
| Zm00001d044668_P001 | Maize | extracellular | 21.99 | 33.82 |
| AT5G26160.2 | Thale cress | nucleus | 27.92 | 33.3 |
| Zm00001d020517_P001 | Maize | mitochondrion | 11.08 | 26.65 |
| Zm00001d037913_P001 | Maize | plastid | 4.81 | 25.34 |
| AT1G42550.1 | Thale cress | nucleus | 17.01 | 23.49 |
Protein Annotations
| MapMan:20.5.6 | EntrezGene:832183 | ProteinID:AED92866.1 | EMBL:AF296832 | EMBL:AK230211 | ArrayExpress:AT5G20610 |
| EnsemblPlantsGene:AT5G20610 | RefSeq:AT5G20610 | TAIR:AT5G20610 | RefSeq:AT5G20610-TAIR-G | EnsemblPlants:AT5G20610.1 | TAIR:AT5G20610.1 |
| Unigene:At.31164 | EMBL:BT004202 | ncoils:Coil | UniProt:F4K5K6 | GO:GO:0003674 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009628 |
| GO:GO:0009637 | GO:GO:0009902 | GO:GO:0009903 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030048 |
| GO:GO:0031022 | InterPro:IPR019448 | RefSeq:NP_197561.1 | InterPro:NT-C2 | PFAM:PF10358 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS51840 | PANTHER:PTHR33414 | PANTHER:PTHR33414:SF1 | UniParc:UPI000016253F | SEG:seg | : |
Description
PMIR1Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:F4K5K6]
Coordinates
chr5:+:6968611..6972995
Molecular Weight (calculated)
128163.0 Da
IEP (calculated)
4.643
GRAVY (calculated)
-0.640
Length
1164 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSKVNSEESS SSQKLLKEVE KISEALYVNK NPRGSVAGSN KTPTKPLSRS NLAEPKEKKS FWNWPLRAIN HVRNRRFNCC FSAQVHSIEG LPPIFQDLSL
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.